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SCN18_30_10_14_R2_B_scaffold_475_21

Organism: SCN18_30_10_14_R2_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_63_12

near complete RP 50 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 25083..25958

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWD9_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 72.9
  • Coverage: 284.0
  • Bit_score: 415
  • Evalue 3.70e-113
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 279.0
  • Bit_score: 415
  • Evalue 4.00e-113
rpoH; RNA polymerase factor sigma-32 similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 284.0
  • Bit_score: 414
  • Evalue 1.40e-113

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGCAGTCGCGGCCTTCCGGCCCTTTCCAGCGATGCGGGTCTTTCGCGCTACTTGAGCGAAATCCGCAAATTTCCCCTTTTGACTCCCGAAGACGAATTCATGTTCGCCAAGCGCCTCAAGGAGCATGGCGACCCCGAGGCCGCGCGCCGGCTGGTCACCAGCCATCTGCGCCTGGTTGCCAAGATCGCGATGGGTTATCGCGGCTATGGCTTGCCGGTGTCGGAAATCGTGTCCGAAGGCAATGTCGGCCTGATGCAGGCGGTCAAGCGCTTCGATCCCGACAAAGGCTTCCGTCTCGCCACTTATGCGATGTGGTGGATCCGCGCCGCTATCCAGGAATATGTCCTGCGCAGCTGGAGCATGGTGAAGATGGGCACCACCGCGGCCCAGAAGAAGCTGTTCTTCAACCTGCGCAAGGCCAAGTCCAATATCGGTGCCATCGAGGAAGGCGATCTCACGCCCGCTCACACCCACAAGCTGGCCGACCAGCTGGGTGTCACCGAGCGCGAAGTGACGGAAATGAATCGCCGTTTGTCCGGCCCGGATTCGTCGCTCAACGCGCCGCTGCGTTCGGAATCGGAAAGCGAATGGCAGGACTGGCTGGCCGACGACACCATGGACCAGGAAACCCGGCTGGCCGAGCGCGAGGAGCGCGGCGACCGGCACGAGCTCCTGACCAGCGCGCTCGACACGTTGAGCGAACGCGAGCGCGACATCATCCAGGAGCGGCGGTTGAAGGACGAGCCTGCCACGCTGGAAGAGCTGTCGCAGAAATACGGCGTCTCCCGCGAGCGCGTGCGCCAGATCGAAGTGCGCGCTTTCGAAAAACTGCAGGCCGCCATGCAGCCCAAACAGATCGCTGCACCGGCTTAA
PROTEIN sequence
Length: 292
MSSRGLPALSSDAGLSRYLSEIRKFPLLTPEDEFMFAKRLKEHGDPEAARRLVTSHLRLVAKIAMGYRGYGLPVSEIVSEGNVGLMQAVKRFDPDKGFRLATYAMWWIRAAIQEYVLRSWSMVKMGTTAAQKKLFFNLRKAKSNIGAIEEGDLTPAHTHKLADQLGVTEREVTEMNRRLSGPDSSLNAPLRSESESEWQDWLADDTMDQETRLAEREERGDRHELLTSALDTLSERERDIIQERRLKDEPATLEELSQKYGVSRERVRQIEVRAFEKLQAAMQPKQIAAPA*