ggKbase home page

SCN18_26_2_15_R2_B_scaffold_113_15

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: comp(10423..11988)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter EmrB/QacA subfamily n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q477L0_CUPPJ similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 498.0
  • Bit_score: 516
  • Evalue 1.60e-143
EmrB/QacA family drug resistance transporter similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 498.0
  • Bit_score: 516
  • Evalue 4.60e-144
Drug resistance transporter EmrB/QacA subfamily {ECO:0000313|EMBL:AAZ59423.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 498.0
  • Bit_score: 516
  • Evalue 2.30e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → SCNPILOT_CONT_750_BF_Rhodospirillales_68_10 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGCCGAACCAGGACCCCGCGCCGCCCGTTCCTGACGCGACTCCGCGGTTCACGCACCAGCAGATCCTGCAGGTGCTCAGTGGCATCCTGCTCTGCATCTTCCTGGCCGCGATCGACCAGACCGTGGTCATCCCCGCGGTGCCGGCGATCGCCGCGGACCTGAATGGATTCGGCCATCTCGCCTGGATCGTCTCGGCCTACCTCCTGACCTCCACCGCGATGACGCCGATCTACGGCAAGCTCTCCGACATCTACGGCCGTCGCAAGCTGCTGCTGATCGCGCTGGCGATCTTCGCCGTGACCTCCGGGCTCTGCGCCCTGGCGGGCAGCCTCGGCCAGCTCGTGATCGCCCGCGCGCTGCAGGGGATCGGCGGCGCGGGGCTGATGTCGATGGCGCAGGCGGCGATCGCCGACGTGGTCAGCCCACGGGAACGGGGACGCTACCAGGGCTACATGGCCTCGACCTGGGGCATCGCCTCGGTCGCCGGCCCGGTGATCGGTGGCTGGGTGACGGATGCGCTCTCCTGGCGCTGGATCTTCTGGATCAACCTGCCGGTCGCGGTGATCGCGATGGTCCTGTGCGACCGCGCGCTGCGGGTGCTGCCGATCCGATCCGGCAAGGCGCGGATCGACTGGGCCGGGGCGGGCCTGCTCACCGCAGCGGTCAGCGCCTGGCTGCTGGTGTTGAGCTGGGGCGGGGTGGAGGCACCCTGGACCTCCCCCCTCATCCTCGGCCTCGCCGCGGCCGGGCTCGTGCTGATCGCGCTGCTGGCGCGGCAAGAGCGCCGGTTCTCCGACCCGCTGCTGCCGCCGCGGCTGTTCTCCAATCCGGTTTTCGTGCGCGGCGTCGCGATCGCGTTCTGCGGCGCCCTGGCGCTGTTCGGCGGCAGCTTCCTGTTGCCCCTGTTCTTCCAATTGGTGCGCGGCGCCGACGCGGCGATGTCCGGCGCCCTGATCGTACCCTTCCTCGGCCTCAACTGCGTCGGTGCGATCTGCGCCGGCTGGCTTGGTCGCCGTCGCGGCCGGATGAAGGCGATCATGGTGGCGGGGCTGATCGGGTGCATGGTCGGCTTCGTGCTGCTGGCATTCGCCGGCGCGCAGACGCCGCGCCTGCTGCTGCTGGGCGCGCAGGCTGTGCTGGGCTTCTCCCTGGGACTGGTGATGCCGAGCAGCCTCGTGACGGTGCAGAACGCGGCGGAGCGTCGTGATATCGGCGCCGCAACCGGCTGCCTGCTGTTCCTGCGCTCGATGGGCGGCGCGTTCGGCTCCACGCTGGTGGGCGCGATCCTGGCCGCCGGGTTCGCCTCCGAACTCGCGCGGCTGGGGATCACCGCGCATATCGAGCTGGGCGAAGTGCGCCAACACGGCGGGGCACTGGCCGGCATCACGCCGGCGATGATGCCACAGGTGCAGGTCGCCCTGGCCGACGCGTTCCACTGGGCCTTCCTCGCCTGCGCGATCGCCATGGCGGTTGCGGTCGTCGTGGCGCTGGGAATGCGCGACCTGCCGCTGCGCACCGCCTCGGCGCACGAGCCGCCGGCGGAGCCGGCCGCCCTGGCGCACTGA
PROTEIN sequence
Length: 522
MPNQDPAPPVPDATPRFTHQQILQVLSGILLCIFLAAIDQTVVIPAVPAIAADLNGFGHLAWIVSAYLLTSTAMTPIYGKLSDIYGRRKLLLIALAIFAVTSGLCALAGSLGQLVIARALQGIGGAGLMSMAQAAIADVVSPRERGRYQGYMASTWGIASVAGPVIGGWVTDALSWRWIFWINLPVAVIAMVLCDRALRVLPIRSGKARIDWAGAGLLTAAVSAWLLVLSWGGVEAPWTSPLILGLAAAGLVLIALLARQERRFSDPLLPPRLFSNPVFVRGVAIAFCGALALFGGSFLLPLFFQLVRGADAAMSGALIVPFLGLNCVGAICAGWLGRRRGRMKAIMVAGLIGCMVGFVLLAFAGAQTPRLLLLGAQAVLGFSLGLVMPSSLVTVQNAAERRDIGAATGCLLFLRSMGGAFGSTLVGAILAAGFASELARLGITAHIELGEVRQHGGALAGITPAMMPQVQVALADAFHWAFLACAIAMAVAVVVALGMRDLPLRTASAHEPPAEPAALAH*