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SCN18_26_2_15_R2_B_scaffold_222_22

Organism: SCN18_26_2_15_R2_B_SCNPILOT_CONT_750_BF_Rhodospirillales_68_10_70_15

near complete RP 48 / 55 BSCG 51 / 51 MC: 1 ASCG 9 / 38
Location: 24854..25243

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 129.0
  • Bit_score: 154
  • Evalue 5.60e-35
Ribonuclease VapC n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0BS80_RHILT similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 129.0
  • Bit_score: 154
  • Evalue 4.00e-35
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 129.0
  • Bit_score: 154
  • Evalue 1.10e-35

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Taxonomy

SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → SCNPILOT_EXPT_1000_BF_Rhizobiales_69_8_partial → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
GTGCTGGTCGTCGACACATCGGTGCTCATCAACAACATCCGCATGGTTCGCACGACTTCGGTCCTGCGCATGTTGGACGCGAGCCTTGCGACCGAGATCCTGGTCGGTGACGTCGTCCTGCTCGAAATCCTGCAAGGCGCCCGCGACGAGTCCCATGCGGCGCGCCTCGAGGCGGAACTGCGTCACTTCCGGATCGTCCCGATGCTCGATCCGCGCATCGCGATCGAGGCCGCGGCCAACTTCCGTCGCCTGCGCGGGATCGGCATCACCGTCCGCAAGACGATGGACCTGATCATCGGCACCTACTGCCTGATGCACGGCTACGCCCTGCTGCACGACGACCGCGACTTCGACCCGATGCAGCGGCATCTGGGCCTGCGGGTCGCGTGA
PROTEIN sequence
Length: 130
VLVVDTSVLINNIRMVRTTSVLRMLDASLATEILVGDVVLLEILQGARDESHAARLEAELRHFRIVPMLDPRIAIEAAANFRRLRGIGITVRKTMDLIIGTYCLMHGYALLHDDRDFDPMQRHLGLRVA*