ggKbase home page

SCN18_25_8_15_R2_B_scaffold_5904_6

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13-related_73_8

near complete RP 44 / 55 MC: 1 BSCG 44 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(4417..5046)

Top 3 Functional Annotations

Value Algorithm Source
tail fiber protein n=1 Tax=Burkholderia pseudomallei RepID=UPI00016ABD33 similarity UNIREF
DB: UNIREF100
  • Identity: 32.5
  • Coverage: 166.0
  • Bit_score: 65
  • Evalue 5.10e-08
phage tail similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 150.0
  • Bit_score: 70
  • Evalue 5.90e-10
Prophage tail length tape measure family protein {ECO:0000313|EMBL:KGD55309.1}; TaxID=28450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (Pseudomonas pseudomallei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 31.9
  • Coverage: 166.0
  • Bit_score: 64
  • Evalue 1.60e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 → SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ACCATCGCGACGAGCGCGGAGACGACGGTCACGAACTTCGTCGGCACGACGAACGAACGTCGCGCCTCGATCCAGGTGTCCGCGTCGACGTCGGATGCCGAGGAGAAGATCTCCGTGCTCACCCGTGCACGGAGGGTGGCCGTCTCGGCCTTCATCCCGGGATTCTTCGGGCTTCGCGAGGGCGGACCCGTGACGTATCGCGCAGCGGGCGGCCCCGTCCACGGGCCTGGCACCGGTACGAGCGACAGCGTTCCGGCAACCGGTCCGTTCGGGTCCCGCTACCAGCTCTCCAACGGAGAGCACGTATGGACGGCACGCGAGACGGCCGCCGTCGGAGGGCACGTGGAGATGCTGCGGCTGCGCCGCGCAGCGCTCACCGGACGGGTCAGCTACCGAGCCGGGGGCGGGAGCATCGAGCCCCGGTACCTCACGCCTCGGGTCTCCCCGCAGGTGTACGTCAACACGACACCGACGGCCGACCTCTCGGCGGTGCGACAGATCGTGCTGGACGCCGTCTCGGAGTTCGCGCGCGTATCGACAACAGCAGCAGCAGACATCTCCCAGTCGAACCTCGCGGGTGCCGCGAGATCGCAGGGGAGCGAGTTCCAGACGAGGGGGCCGATGTGGTGA
PROTEIN sequence
Length: 210
TIATSAETTVTNFVGTTNERRASIQVSASTSDAEEKISVLTRARRVAVSAFIPGFFGLREGGPVTYRAAGGPVHGPGTGTSDSVPATGPFGSRYQLSNGEHVWTARETAAVGGHVEMLRLRRAALTGRVSYRAGGGSIEPRYLTPRVSPQVYVNTTPTADLSAVRQIVLDAVSEFARVSTTAAADISQSNLAGAARSQGSEFQTRGPMW*