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SCN18_25_8_15_R2_B_scaffold_3018_1

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: 19..420

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ7_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 133.0
  • Bit_score: 212
  • Evalue 2.20e-52
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 133.0
  • Bit_score: 227
  • Evalue 7.00e-57
50S ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 79.7
  • Coverage: 133.0
  • Bit_score: 212
  • Evalue 6.10e-53

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Taxonomy

CN-SCN_Devosia_27x → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGTCCCGCGTTAAGAGAGACGTTACCGCCCACGCTCGCCACAAGAAGGTCCTGAAGGCTGCTTCGGGCTTCTACGGCCGCCGCAAGAATACCATCCGCACCGCCAAGGCCGCCGTCGACAAGGCCGGCCAGTACGCGTACCGCGATCGCCGGGTCAAGAAGCGCAACTTCCGCGCCCTCTGGATCCAGCGCATCAACGCCGCGGTACGTGACCACGGCCTGACCTACGGTCGATTTATCGACGGCCTCAGCAAGGCCGAGATTGCCGTCGACCGCAAGGTGCTCTCCGATCTCGCGATCACCGAGCCCGCAGCGTTCGCCGCGCTGGTTGCCCAGGCCAAGAAGGCCCTGGGGTATCTCGAGAAGCTCGAGACGACCACGCACGAGCGCATCAGCGCGTAA
PROTEIN sequence
Length: 134
MSRVKRDVTAHARHKKVLKAASGFYGRRKNTIRTAKAAVDKAGQYAYRDRRVKKRNFRALWIQRINAAVRDHGLTYGRFIDGLSKAEIAVDRKVLSDLAITEPAAFAALVAQAKKALGYLEKLETTTHERISA*