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SCN18_25_8_15_R2_B_scaffold_3118_2

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: comp(1037..2098)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R898_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 324.0
  • Bit_score: 383
  • Evalue 1.90e-103
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC67675.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.9
  • Coverage: 336.0
  • Bit_score: 462
  • Evalue 4.50e-127
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 324.0
  • Bit_score: 383
  • Evalue 5.30e-104

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Taxonomy

CN-SCN_Devosia_27x → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGAGCGATACCGACGACCGCACTTTTTCCGGCGAACTGGGCCAGTTGCTCGACCGCGGAGATGCCCGCTCGTCCCGTCGGCGCCGCGCCGAGATCACCCTGCACCAGTTGCGCATCTTCTGGGCCGTCGCCCATTCCGAGACCCTGACGCGGGCGGCCAAGCACCTCGGCCTCGCACAGCCTTCTCTGTCCCAGCAGCTCGCCAAGCTCGAGGCGACAGCCGGAACCCGCCTTTTCCGCCGCCATGCCACGGAGATGACGTTGACCGAAGCAGGCACGTTCCTGCTGCCCAAGGCGGAGCAGATCCTGCGAAACATGCAGGACCTCGAGGATGGCCTCGCCCAGTACTCCGGCGGCCAGCGCGTCACCATCCGGCTTGCGGGTATCAATTCGGTCCTGCGGGTTGTCCTGCCCGGCGCGATCAACGCGGTGCAGGCGAAGTTCCCGGACGCCGATTTCGACATCCAGGAAAGCGCTCCCGGCGACATCCTCGAGATGCTCTACAGCCGCCGCGTCAATATCGGCCTGCTCGCCGCCAACTCCGTGGCCGAGGCCGGTGTCGGCTTCCTGCAGGTTCCGGTGATCGAAGACCCCTACGTCCTCGTCGTCCCCGAGCGCCTCGACCTCGATGGTATCGCCGACGCAGCCGACCTGCCCGCCGATGCGGCCGCCATTCTCAACCGCTCCATTCAGTTCATCTTCGGCACGCAGCACGCCAAGCGCGTCGCCGACTGGTACGATCATATGCTGCCCGAGCATCGAGTCGTTGCCCAGTGCCGCAGCTTCGAGGTGGCTCTGGGCCTCGTCCGCGCCGGCTCCGGCATCTGCCTGGCTCCCGCACTTTCAACCCTCAGCGGAGGCACCTCGCTCGATGGTGTTCGCCTCTACCGCATCAATGCCGAGGCGCGCCGCATCGTCGCACTGGTGGCCTCGCAGTATCGGCGGCAGGAGCCGTACGAGAGCCTGATCAATGCCCTGCAGGCGGCGGGCGCCAGCCTCGCGCTGCCCGCCATCCGCCCGACCCCGCCGTTCCTCGACCGACCCTCTCTCTCCGATTTCTAA
PROTEIN sequence
Length: 354
MSDTDDRTFSGELGQLLDRGDARSSRRRRAEITLHQLRIFWAVAHSETLTRAAKHLGLAQPSLSQQLAKLEATAGTRLFRRHATEMTLTEAGTFLLPKAEQILRNMQDLEDGLAQYSGGQRVTIRLAGINSVLRVVLPGAINAVQAKFPDADFDIQESAPGDILEMLYSRRVNIGLLAANSVAEAGVGFLQVPVIEDPYVLVVPERLDLDGIADAADLPADAAAILNRSIQFIFGTQHAKRVADWYDHMLPEHRVVAQCRSFEVALGLVRAGSGICLAPALSTLSGGTSLDGVRLYRINAEARRIVALVASQYRRQEPYESLINALQAAGASLALPAIRPTPPFLDRPSLSDF*