ggKbase home page

SCN18_25_8_15_R2_B_scaffold_5656_3

Organism: SCN18_25_8_15_R2_B_CN-SCN_Devosia_27x-related_67_10

near complete RP 50 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 11 / 38
Location: comp(859..1269)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S6 n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037F17BC similarity UNIREF
DB: UNIREF100
  • Identity: 75.5
  • Coverage: 139.0
  • Bit_score: 204
  • Evalue 3.50e-50
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.1
  • Coverage: 136.0
  • Bit_score: 218
  • Evalue 5.70e-54
rpsF; 30S ribosomal protein S6 similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 139.0
  • Bit_score: 191
  • Evalue 1.10e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGGCCCTTTACGAACACATCTTCCTGGCGCGCCAGGACGTGTCCCCGACGCAGGTCGAGGAACTGACCACCGCGTTCACCGACCTGATCACCCAGGGCGGCGGCAAGGTCACCAAGAACGAGTACTGGGGCCTCAAGTCCCTCTCGTACCGCATCAAGAAGAACCGCAAGGCGCACTACACGCTGCTCAACATCGACGCGCCGCACGCCGCGGTGGCCGAGATGGAGCGCCAGCAGGGCCTCAGCGAAGACATCCTGCGCTTCATGACGATCCGCGTCGATGAGCTCGAGGAAGGCCCGTCGGCCATGATGCAGAAGCGCGACCGCGACGACGACCGTGGCGAGCGTGGTGGCCCACGCGGCGATCGCGGCGGTTTCGACCGCGGCAGCCGTCCGCCCCGCCGGTTCTAA
PROTEIN sequence
Length: 137
MALYEHIFLARQDVSPTQVEELTTAFTDLITQGGGKVTKNEYWGLKSLSYRIKKNRKAHYTLLNIDAPHAAVAEMERQQGLSEDILRFMTIRVDELEEGPSAMMQKRDRDDDRGERGGPRGDRGGFDRGSRPPRRF*