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SCN18_25_8_15_R2_B_scaffold_1251_4

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 4094..4306

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Jannaschia sp. (strain CCS1) RepID=Q28L70_JANSC similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 66.0
  • Bit_score: 107
  • Evalue 5.20e-21
Cold-shock protein {ECO:0000313|EMBL:KKB12377.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 70.0
  • Bit_score: 137
  • Evalue 3.80e-30
cold-shock DNA-binding protein family protein similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 66.0
  • Bit_score: 107
  • Evalue 1.50e-21

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Taxonomy

SCNPILOT_EXPT_1000_BF_Mesorhizobium_61_14 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGGCCCTCAAAGGCACCGTAAAGTTCTTCAATTCCACCAAGGGTTTTGGCTTCATCACCCCGGAAACCGGCGGCAAGGACCACTTCGTCCACATCTCCGCCGTGCAGCGTTCCGGTATCGATGGTCTCTACGAGAACGACAAGGTCACCTACGAAGTCGAAACCGGCCGTGATGGTCGTGAATCGGCTGTCAACCTGACCCTGGTTCAGTAG
PROTEIN sequence
Length: 71
MALKGTVKFFNSTKGFGFITPETGGKDHFVHISAVQRSGIDGLYENDKVTYEVETGRDGRESAVNLTLVQ*