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SCN18_25_8_15_R2_B_scaffold_3181_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: 2602..2985

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding response regulator n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RCR5_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 121.0
  • Bit_score: 194
  • Evalue 5.80e-47
Chemotaxis protein CheY {ECO:0000313|EMBL:KFL28788.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 127.0
  • Bit_score: 238
  • Evalue 3.80e-60
DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 121.0
  • Bit_score: 194
  • Evalue 1.60e-47

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
TTGGCCATTGATATCCTGATTGCCGAGGACGAGCCGTCTATTCTGGAATCGCTGGATTTCATCCTGCGCCGCGCCGGCTGGAGCATCAGCTCCGTAACAGATGGCGACGCAGTGCTTGAGGGCGTGCGCCGGTTGAAGCCGCGCATGCTGGTGCTCGATGTCATGCTGCCCAAGCGCAGCGGCTTCGACATCCTGAAGCACCTGCGAGCCGATGCCGACACGGAAAACCTGCCGGTATTGATCCTCACGGCCAAGGGTCAGCAACAGGATCGGCGCATCGCTGAAGAGCTGGGCGCCAATGGCTTCGTGACCAAGCCCTATTCCAACGCCGAAGTGGTGGGAGCCGTGCGGAGCCTTTTGGGCGAAGATGGCGGACAGGCGTAA
PROTEIN sequence
Length: 128
LAIDILIAEDEPSILESLDFILRRAGWSISSVTDGDAVLEGVRRLKPRMLVLDVMLPKRSGFDILKHLRADADTENLPVLILTAKGQQQDRRIAEELGANGFVTKPYSNAEVVGAVRSLLGEDGGQA*