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SCN18_25_8_15_R2_B_scaffold_8231_4

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(3396..3644)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 80.0
  • Bit_score: 149
  • Evalue 1.10e-33
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFV0_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 73.0
  • Bit_score: 118
  • Evalue 2.60e-24
cell division protein FtsJ / ribosomal RNA large subunit methyltransferase J similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 73.0
  • Bit_score: 118
  • Evalue 7.40e-25

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Taxonomy

SCNPILOT_EXPT_1000_BF_Devosia_62_26 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
CTGCGCATCGTGCATCTCATCGAGATCGCCGCCGATTTCGCCATCCAGGTGCTCAATCCCGGTGGCTCCTTCGTCGCCAAAGTTTTCCAGGGCGGCACCGAGCATGAGCTTCTGCACATGCTGAAGCGCCACTTCAAGACGACCCTCCATGTGAAGCCGCCGTCCAGCCGCAGCGAGTCGGCGGAAGCCTATCTTGTGGCCAAGGGGTTTAAAGGCAAGGTCGAGGCGGAAGAGAGCGACGACGAATAG
PROTEIN sequence
Length: 83
LRIVHLIEIAADFAIQVLNPGGSFVAKVFQGGTEHELLHMLKRHFKTTLHVKPPSSRSESAEAYLVAKGFKGKVEAEESDDE*