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SCN18_25_8_15_R2_B_scaffold_8347_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(2767..3357)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF sigma factor (Sigma70) n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2W6_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 169.0
  • Bit_score: 190
  • Evalue 9.90e-46
RNA polymerase ECF sigma factor (sigma70) similarity KEGG
DB: KEGG
  • Identity: 55.0
  • Coverage: 169.0
  • Bit_score: 190
  • Evalue 2.80e-46
RNA polymerase ECF sigma factor (Sigma70) {ECO:0000313|EMBL:CBS87714.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 169.0
  • Bit_score: 190
  • Evalue 1.40e-45

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGAATTCCCCCAAGAAATCCGGGGATGCGGCGCTCGAACTGGCCATGTCTGGGCATCTGCTCGCCATTGCCCGACACAGCGACCGGCAGGCCTTCGAGGCGCTGTTCCTGCATTTCGCCCCGCGCATCAAAGCCTATTTGATGCGGCTCGGGGGCGATGCGGCGGGCGCCGAGGAACTGGCGCAGGAAGTCATGACCATGGTCTGGCGCAAGGCCGGTCTTTATGACCCGGCCAAGGCAAGCGCGGCGACCTGGATCTTTGCCATTGCCCGCAACCGGCGCATCGACGCGTTCAGGCGCGAAAAACACCCAGAGCTCGACCCGGAAGAGCCGGCGCTGCGGATCGACGAGGATGTGGCGGCCGACGCGGCGCTCGAGGTCAAGCAGTCCTCGGCGCAGGTCGTGGAAGCCATAGCCGATCTTTCTGCCAGCGAGCGGCAACTCCTTACGCTCGCTTACTACGAGGACAAATCCCAGACCATGATTGCCGCCGAACTCGGCATTCCGCTCGGCACCGTCAAGTCGCGCATGCGTCAGGTATTCCGCAAAATGCGCGATTATCTGACGGCACAGACGGGGGAGCGGCCGTGA
PROTEIN sequence
Length: 197
MNSPKKSGDAALELAMSGHLLAIARHSDRQAFEALFLHFAPRIKAYLMRLGGDAAGAEELAQEVMTMVWRKAGLYDPAKASAATWIFAIARNRRIDAFRREKHPELDPEEPALRIDEDVAADAALEVKQSSAQVVEAIADLSASERQLLTLAYYEDKSQTMIAAELGIPLGTVKSRMRQVFRKMRDYLTAQTGERP*