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SCN18_25_8_15_R2_B_scaffold_537_7

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(6863..7447)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGS6_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 190.0
  • Bit_score: 216
  • Evalue 1.30e-53
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC95442.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 193.0
  • Bit_score: 265
  • Evalue 5.80e-68
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 190.0
  • Bit_score: 216
  • Evalue 3.60e-54

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGCAGGATGATATACTCATACAGATCAGCAATAAGATAAAAGAAAGCAGGAAGGCCCAGAAAAAAACGGTACAGGAGCTGGCCACTGAAGCGCAGGTGAGCAAGGGGTTGATCTCACAAATTGAGAACAACCGGACTGTCCCCTCCTTGCCTGTGCTTATGAATATTGTACTGGCCCTTAATATTGATCTGAAAGATTTTTTTGAAGATATCAGTCATAACAAAGAAGCCAAACAAAAGATCATTATAAAAACACAAAAAGATTACCAGGCTTTTGAAAAGGAACCTGCCAAAGGGTTTAAATACAAAAGAATACTTGCACGCAATATGGATGGCGGACCTGTAGATACCATTTTGCTGGAACTGAAAAAGGGCGCTAAAAGAACGCACATGATCAAAACAGACGCGTATGAATATAAATATGTGATCAAAGGAAAAGTAGAATACCAGATTGAAAATGAAAGCTATTTGCTGAACGAAGGAGATTCACTTTTTTTTGATGGCAGGTTACCGCACAAGCCGGCTAATGTAGGTACAGAAGACGCCCTTATGCTGGTAATCTATTACTTCATAACAGAGCGCTGA
PROTEIN sequence
Length: 195
MQDDILIQISNKIKESRKAQKKTVQELATEAQVSKGLISQIENNRTVPSLPVLMNIVLALNIDLKDFFEDISHNKEAKQKIIIKTQKDYQAFEKEPAKGFKYKRILARNMDGGPVDTILLELKKGAKRTHMIKTDAYEYKYVIKGKVEYQIENESYLLNEGDSLFFDGRLPHKPANVGTEDALMLVIYYFITER*