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SCN18_25_8_15_R2_B_scaffold_537_29

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 35895..36488

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6E9D0_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 192.0
  • Bit_score: 142
  • Evalue 3.10e-31
Uncharacterized protein {ECO:0000313|EMBL:KIC95801.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 175.0
  • Bit_score: 149
  • Evalue 3.60e-33
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 188.0
  • Bit_score: 138
  • Evalue 1.70e-30

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 594
GTGGCATCCGGTACTTCCCAGACAGATTCAATCTTGCTTTCTGCAATAGCTTTGGGAGACGAAGCCGCTTTTACAATCCTGTTTGAGCGTTACCGTGATAAGCTCTTTTACTACCTGCTGAAGCATGTTAAATCTCCCGAAGTTGCGGAAGAAATTGTTACGGATATTTTTATGAAGCTTTGGACAGGAAGGGCATTGGCAGAACAGATCAAAGATGTCGGCGCATTTCTTCATAAAGTAGGTTACTATAAAGCGCTGGATTTTTTACGGGTAACCGCCCGCCACACCCGTTTGCGGCAGATATATATTGATTATGCATCCCTTTCCGGCGAACCACAGGCAGATGAATTGATGATCAATGCTGAGTTGAAGGTGTTATTATACAAAGCGATCAACGGACTTTCCCCGCAGCGGAAAATGATTTACCGGATGAGCAGGCAGGAAGGGCTCACGCACGAACAGATCGCGGAATTATTAGGACTGTCGCCCAGCACAATCAATAATGCGCTTGTTGCTGCCAACCGATCTATTGAAAAAGCGCTCCGCACCTATGCAGGTCAAATGGATATTCTGCTGCTTTATTTCCTGTTCTGA
PROTEIN sequence
Length: 198
VASGTSQTDSILLSAIALGDEAAFTILFERYRDKLFYYLLKHVKSPEVAEEIVTDIFMKLWTGRALAEQIKDVGAFLHKVGYYKALDFLRVTARHTRLRQIYIDYASLSGEPQADELMINAELKVLLYKAINGLSPQRKMIYRMSRQEGLTHEQIAELLGLSPSTINNALVAANRSIEKALRTYAGQMDILLLYFLF*