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SCN18_25_8_15_R2_B_scaffold_1237_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 459..908

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding protein family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IAF6_FLUTR similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 141.0
  • Bit_score: 160
  • Evalue 8.40e-37
Putative cold shock protein {ECO:0000313|EMBL:GAO43832.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 144.0
  • Bit_score: 233
  • Evalue 1.90e-58
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 55.3
  • Coverage: 141.0
  • Bit_score: 169
  • Evalue 3.90e-40

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 450
ATGGCAACAAGCTGGAATAAAAAAGAAAGAGAAAATAAAAAGAAAGAAGAACGTAGAAAAAAAGAAGAAAAAAGACAGGAGCGCAAAGAAAATGGTGGCAAGGGTAAAAGCCTTGACGACATGCTGGCTTATCTTGACGAAAATGGTAATCTTAGTTCAGTGCCGCCAGACAACAGAAAACGAATAGAGATAAATGCTGATGATATAGAGATTGGCGTTCCTAAACAAAAAGAACTAACCCCTGAGGAGTTGATACGAAAAGGAGTTGTTACTTACTTTAACAATGCAAAAGGATTTGGCTTTATTGAAGACAGCGAAAACGGGCAACGCCTGTTTGTACACCAGTCATCATCCGGCAAACCACTGCAGGAAGGTCTAAAGGTAACATTTGAAATAGAAAAAGGACCAAGAGGATATAATGCGGTTAATGTTATAAGCGCAAAGCAGTAA
PROTEIN sequence
Length: 150
MATSWNKKERENKKKEERRKKEEKRQERKENGGKGKSLDDMLAYLDENGNLSSVPPDNRKRIEINADDIEIGVPKQKELTPEELIRKGVVTYFNNAKGFGFIEDSENGQRLFVHQSSSGKPLQEGLKVTFEIEKGPRGYNAVNVISAKQ*