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SCN18_25_8_15_R2_B_scaffold_1053_20

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(24993..25583)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI0003613E1B similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 189.0
  • Bit_score: 115
  • Evalue 4.10e-23
ECF RNA polymerase sigma factor SigL {ECO:0000313|EMBL:KHJ38635.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.2
  • Coverage: 179.0
  • Bit_score: 114
  • Evalue 9.70e-23
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 181.0
  • Bit_score: 109
  • Evalue 6.30e-22

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 591
ATGCCGGAGTGTATATTTCAAAGCGATTCCGCTTGCTGGAAAGAACTAAAACAAGGTAATCCCGAGGCGCTGGGATACCTGTACGACACGTACATTGACCGCCTCTTTCACACTGCTTTTAAAATGACGGATAACCGGGAGCTGGCAAAGGACGCTTTACAGGAAGTGTTCATTGAGATCTGGCATTACCGCAACAGCATAGGTGAGGTAAATCATTCCCACAGTTATCTTGCCAAGGTTTTAAAAAGCATTATCCTTAAAAAGGTGAAAACAAAAATGGTGATCAACACTTTGTCTGATAACGAGCATGGTACTGATCATGATGATAATATAGAGCAGTCTATTATTATGGCCGACCTTGCAACAGAGCAAAAAAACCGTTTATACAAAGCATTATCACAACTCACCAACAGGCAGAAGCAGGTAGTTAAACTCCGTTTTTTTGAAGGACTGACTTATGAGCAGATAGCTGTTAAATTATGTATGAATTATCAATCAGTAAATAATCTTGCTTTCCGGGCTATGCTTAACCTGAGAAAGCAAATGCAGCCGGTTGTGCCGGTAATAGCGATACTATTGCTGCTGGTTTAA
PROTEIN sequence
Length: 197
MPECIFQSDSACWKELKQGNPEALGYLYDTYIDRLFHTAFKMTDNRELAKDALQEVFIEIWHYRNSIGEVNHSHSYLAKVLKSIILKKVKTKMVINTLSDNEHGTDHDDNIEQSIIMADLATEQKNRLYKALSQLTNRQKQVVKLRFFEGLTYEQIAVKLCMNYQSVNNLAFRAMLNLRKQMQPVVPVIAILLLLV*