ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1513_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(1125..4253)

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 1046.0
  • Bit_score: 1058
  • Evalue 0.0
DNA/RNA helicase, superfamily I n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXA2_SOLCM similarity UNIREF
DB: UNIREF100
  • Identity: 50.1
  • Coverage: 1046.0
  • Bit_score: 1058
  • Evalue 0.0
DNA/RNA helicase similarity KEGG
DB: KEGG
  • Identity: 50.1
  • Coverage: 1046.0
  • Bit_score: 1058
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3129
ATGAATACTAAAGAGCTGGAATTCCTGGAATATTACAACAAACTGAATGAGCAGCAAAAAAATGCCGTTGATACTATAGAAGGCCCTGTTTTGGTTAATGCGGGTCCCGGCACAGGCAAAACGCAGGTGCTTGCGTTGCGTATCGCAAATATTCTGCGGCAAACAGATATCAATCCTAATAATATTCTTTGTTTAACCTATACTGATAATGGCGCTATAGAAATGCGCAATCGTTTGCTTAAGATTATTGGTACGCCAGCCTATAACGTGCGCATACACACATTTCACTCTTTTTGTAATGAAGTCATCCAGGATAACCTAACCTACTTTGGCAAGCTTAACCTTTCTCCCATAGGCGACCTGGAGGAAATTGATCTCTTTCATAAGCTGATAGATTCCATTCCGCCAGATAATAAGCTCAAGCGTTTTCGCGGCGAAGTATATTACGAAAAAGACAGGCTGAAAGCATTGTTCAGTTTAATGAAGAAGGAAGCATGGACGCCGGAATATTTGAACGAAAGGATAAAGGATTATGCAGACAATTTGGAAAACCGGGAAGAATTCCAATATAAAAGAAAATACAAAGGCTTTGAAGCGGGTGCTCCTAAAAGAGCAGCCATTGACGATGAAAAGGAAAAAATGGAAACGCTTAGTGCCGCGGTAAATCTTTACCCGCAATACAATACCATGATGGCTGCCGCAGGCCGATATAATTTTGATGATATGATACTGTGGGTGCTGAAAGCCTTTGAAGAAAATAATAACCTGCTGCTGGACTACCAGGAACGGTTTATGTATTTTCTGGTGGACGAATTCCAGGATACCAGCCGCTCACAAAATTTATTGCTGCAAAAACTTACCGGCTATTGGGATGTGCCTAATCTTTTTGTAGTAGGAGATGCGGATCAAAGTATTTTTTCTTTCCAGGATGCGAATGTTGAGAACATTAAAGCTTTTGAAAAAAAATACGAACATGAATTAACTACCATTGATCTTATCAACAATTACCGTTCTACTACTCCTGTTTTAAATGCAGCATACCAACTCATAGCTCATAATACCGGACGCGTAATTAAGCCGGAGAACAACCATCCGCTTATATCATCCAATCCTCTATTTAAAGGTATTGATACCGCACCTGTAATTGTTGAATATGCCAACGCCGGCCAGGAAGCTATTGATATTGCCATGCAGATTGAAAATCTTATTCAGCAGGGTATCAGCGGTAAGGAAATAGCAGTAATATACCGGAATCACGCACAGGCAGAAACGATCATCTCAATGCTGGAAGGCAAAAAGATACCGGTAAATGCCAAAAAGAAAGTGGATATACTTGGGCTGCCTTTTATTCAAAACCTGCTGCTGATATTACAATGGATAGAACGGGAAAAATATATTCCCTATAGCGGCGATGATATTTTATTCCTTCTGCTGCATAGTGACTTCTTTAATCTTCATCCGCTGCAGATTGCTAAACTAACCATTGCGGTTAATGCAAAAAACAAAGCCGCAAAAGAAGACGCATTCTCCCTGCGCCGCATAATAGCGGAATCTGTCGCTCCCAAAGCCGACCTGTTTAACGAGCCTGACGGCCAGTCAGTAAAAGAAATAAGCGATACGCTGGAGCATTTGCTCAAAGCTTCTGTAAATACCACCGTGCAGCAATTGCTGGAGCAGGTTATTCAGAAAGCAGGTGTGCTTTCATACATTATGCAAAGCGCTGAAAAGCCCTGGTTGATGCAGGTGCTGAACGCATTATTTGATCATTTGAAAGAAGAAAGTCACCGCAACCCTGATATAACATTAAAGGAATGGCTGGATAATATAGCCATGATGAAGTCCAGCCGGTTGCCGGTATCGCTGTATAAGATAACCGCGAACGACGAAGGCGTAAACATGGTAACCGCACATGGTGCTAAAGGTTCGGAATATGCGCATGTGTTTGTAACAGGCTGCACACAAAAAATATGGGATGAAAACAGCAGGGGGGCAAACCGCTCCTATAAATTGCCCGATAACCTGAAAAGCAACAGCACAACGCCGCCCGGCATTGAAGAGAACAGGCGGTTGTTTTATGTGGCGCTTACCCGGGCTAAAACACACCTGCATATATCTTACGCTGTAAAAGATGAAAAAGATAAGGAACAAACGCGCAGCACTTTTGTTACAGAATTAATTGAAGACGGCTCACTTCAACCCACCAATAAAATAGTACCTGATATATTGCTTGCTGATTACCTGCAGCAGCAATACATTGAAAAAGCAAAACCTGAAATTGAGCTGGTAGAAGCGGAATATATTGATGATATACTGAAGCGCTATACCATGAGCGTTACCCACCTCAATAATTACCTGAGCTGCCCTTTAAAATTTTATTATCAAAATCTAATCCGCGTACCTGCTGCTAAAAATGAAAGCATGGCTTTTGGCAGCGCTATACACTGGAGCATTGAACGGCTTTTTATAAAAATGAAAGAGAACGGGAATGTTTTTCTTCCTAAAGAAGACCTGCTGGCAGACTTTAACTGGTATATGAAAAATAACCGCGAAGCATTTACGCCGGAGGCATTTAAGCTGAAAAAAGCATATGGAGAAAAAATCTTACCTGACTATTATAATAACTATATTGACAAGTGGAATAAAATAATTTTAGCTGAAAAGAATATCAGGAATGTTACCGTTCAGCATGTGCCTATCAACGGCAAGCTCGATAAGCTTGAATTCAATGGCAGGCAGGTAAATGTGGTTGATTACAAAACCGGCAAATATGAGAATGCTAAAAAGAAATTGGTTCGCCCTAATGACAATGAACCCAATGGAGGCGACTACTGGCGCCAGGCAGTATTCTATAAAATATTACTGGATAATGACAGGACCCATGACTGGCAGGTGGTAAGCACCGAATTTGATTTTATAGAGCCTGTGGGTAAAGAATATAAAACTGAACTGGTAGAAGTAACAGATGCAGATATTACTACTGTAACACAACAGATCATTACCACCTGGCAAAAAATACAAAACCGGGAGTTTAAAACCGGCTGCGGAAAAGCCGACTGTGACTGGTGTAATTTTGTAAAAAGCAATCATCTTTCCGTGGCACTGCACCCGGCGGAAGAAGATGAGGCATGA
PROTEIN sequence
Length: 1043
MNTKELEFLEYYNKLNEQQKNAVDTIEGPVLVNAGPGTGKTQVLALRIANILRQTDINPNNILCLTYTDNGAIEMRNRLLKIIGTPAYNVRIHTFHSFCNEVIQDNLTYFGKLNLSPIGDLEEIDLFHKLIDSIPPDNKLKRFRGEVYYEKDRLKALFSLMKKEAWTPEYLNERIKDYADNLENREEFQYKRKYKGFEAGAPKRAAIDDEKEKMETLSAAVNLYPQYNTMMAAAGRYNFDDMILWVLKAFEENNNLLLDYQERFMYFLVDEFQDTSRSQNLLLQKLTGYWDVPNLFVVGDADQSIFSFQDANVENIKAFEKKYEHELTTIDLINNYRSTTPVLNAAYQLIAHNTGRVIKPENNHPLISSNPLFKGIDTAPVIVEYANAGQEAIDIAMQIENLIQQGISGKEIAVIYRNHAQAETIISMLEGKKIPVNAKKKVDILGLPFIQNLLLILQWIEREKYIPYSGDDILFLLLHSDFFNLHPLQIAKLTIAVNAKNKAAKEDAFSLRRIIAESVAPKADLFNEPDGQSVKEISDTLEHLLKASVNTTVQQLLEQVIQKAGVLSYIMQSAEKPWLMQVLNALFDHLKEESHRNPDITLKEWLDNIAMMKSSRLPVSLYKITANDEGVNMVTAHGAKGSEYAHVFVTGCTQKIWDENSRGANRSYKLPDNLKSNSTTPPGIEENRRLFYVALTRAKTHLHISYAVKDEKDKEQTRSTFVTELIEDGSLQPTNKIVPDILLADYLQQQYIEKAKPEIELVEAEYIDDILKRYTMSVTHLNNYLSCPLKFYYQNLIRVPAAKNESMAFGSAIHWSIERLFIKMKENGNVFLPKEDLLADFNWYMKNNREAFTPEAFKLKKAYGEKILPDYYNNYIDKWNKIILAEKNIRNVTVQHVPINGKLDKLEFNGRQVNVVDYKTGKYENAKKKLVRPNDNEPNGGDYWRQAVFYKILLDNDRTHDWQVVSTEFDFIEPVGKEYKTELVEVTDADITTVTQQIITTWQKIQNREFKTGCGKADCDWCNFVKSNHLSVALHPAEEDEA*