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SCN18_25_8_15_R2_B_scaffold_1385_25

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 22542..23357

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose reductase n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RQ19_LEAB4 similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 269.0
  • Bit_score: 286
  • Evalue 1.80e-74
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AHM61830.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 269.0
  • Bit_score: 289
  • Evalue 3.10e-75
dTDP-4-dehydrorhamnose reductase similarity KEGG
DB: KEGG
  • Identity: 52.0
  • Coverage: 269.0
  • Bit_score: 286
  • Evalue 5.20e-75

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 816
ATGAGTAAAATAAAAGTAGTTATTACCGGGGCAAACGGATTATTAGGGCAGTATTTAATAAGAGATATGGCAAAAGCGGGTTTTGAGGTTTTTGCAACAAGTCGTGGCGCCGGCAGGCTGCCGGACTATGAGGAGGTGGATTATACCTATGCGTCTATTGACATCCGGGATAAGGAAGCTGTTCAGCAATACTTATTAACCGTAAAACCGGCAATTATTATTCATGCCGCAGCCATGGCCCAGCCGGATGCCTGCGAACTGAATAAAGATGAATGCAGGGATATTAATATTACCGCTACGGAAAATATTACAGGGGTTGCTGAAAAATTGGGCGCTCATTTAATATATGTATCAACTGATTTTGTTTTCAGTGGAGATAACGGACCTTACCGGGAAGATGATACACCCGCGCCGGTTAATTATTATGGTGAAAGTAAACTTGCTTCTGAAAAAATTATACAAAGCAGTAAAACAAGCTGGGCTATAGTACGTACTGTTCTGGTGTATGGAAATATTCTTTCCGGAACACGGAGCAATGTGGTAACCTGGGTTAAAGATAATCTTGAGAAAGGAAATCATATAAAAGTGGTGAACGACCAGGTAAGAACGCCTACTTATGTAGAAGATCTTTCCAGAGGCATAGTATTAATAGCGCAACAAAATGCTAAAGGTATTTTTAATATTTCAGGCAAAGAAGTATTTACACCTTATGAAATGGCTGTGCAGGTGGCAGATTACTTCGGGCTTGATAAATCATTGATGGAAAAAGTTACTGCAGATACGTTTACCCAACCTGCCCGCCGCCCATTGAAAACA
PROTEIN sequence
Length: 272
MSKIKVVITGANGLLGQYLIRDMAKAGFEVFATSRGAGRLPDYEEVDYTYASIDIRDKEAVQQYLLTVKPAIIIHAAAMAQPDACELNKDECRDINITATENITGVAEKLGAHLIYVSTDFVFSGDNGPYREDDTPAPVNYYGESKLASEKIIQSSKTSWAIVRTVLVYGNILSGTRSNVVTWVKDNLEKGNHIKVVNDQVRTPTYVEDLSRGIVLIAQQNAKGIFNISGKEVFTPYEMAVQVADYFGLDKSLMEKVTADTFTQPARRPLKT