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SCN18_25_8_15_R2_B_scaffold_2202_13

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(11950..12843)

Top 3 Functional Annotations

Value Algorithm Source
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 291.0
  • Bit_score: 473
  • Evalue 1.20e-130
prpB; Methylisocitrate lyase (EC:4.1.3.30) similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 291.0
  • Bit_score: 461
  • Evalue 1.70e-127
2-methylisocitrate lyase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CJ89_ELIME similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 291.0
  • Bit_score: 469
  • Evalue 1.70e-129

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 894
ATGTCAACACAAGATTTATCAGCAGGCGCACGCTTTAAAAAAGCAATGCAAGAAGAGAATCCTTTACAAATTGTTGGAACAATAAATGCCAATCATGCTTTACTTGCTACACAATCCGGTTTCAAAGCGATCTACCTTTCAGGCGGTGGTGTTGCCGCAGGTTCTTTGGGCATTCCTGATCTTGGCATTACTACGCTCGAAGATGTATTAACAGATATTAACCGTATAACCAATGTTACTGATACGCCCCTGCTGGTAGACATTGATACAGGATTCGGTCCTTCTGCCTTCAATGTGGCAAGAACAGTTAAATCACTCATTAAGGCAGGAGCAGGCGCATTACATATAGAAGACCAGGTGGGCGCGAAACGCTGCGGCCACCGCCCGGGAAAAGAAATTGTAAGTAAAGCCGAAATGGCTGACAGGATTAAAGCTGCTGCTGATGCAAGAACCGACCAGGATTTTGTGATTGGCGCAAGAACAGATGCTTTAGCTAACGAAGGTTTGGAGAAAGCGCTGGAAAGAGCTGTAGCTTACAAAGAAGCAGGCGCTGATTTTATTTTTGCTGAGGCAGTGAGAGAATTAAGCCAGTACGGCGCGTTTGTGAAAGCAACCGGCATTCCGGTACTTGCCAATATAACGGAGTTTGGCATGACGCCAATGTGGACAGTGGAAGAATTAAAAAATGCAGGGGTTGGATTGATATTATACCCGCTATCTGCCTTCAGAGCTGCCAATAAAGCTGCCTTGAATGTTTTCAATACTATCAGGAAAGAAGGCACACAAAAAAATGTTCTTGATACGATGCAAACAAGAGCTGAACTATATGAAAGCATAGGATATCATGCCTTTGAACAAAAATTAGATTCCCTTTTCTCAAAGCATAAATCATAA
PROTEIN sequence
Length: 298
MSTQDLSAGARFKKAMQEENPLQIVGTINANHALLATQSGFKAIYLSGGGVAAGSLGIPDLGITTLEDVLTDINRITNVTDTPLLVDIDTGFGPSAFNVARTVKSLIKAGAGALHIEDQVGAKRCGHRPGKEIVSKAEMADRIKAAADARTDQDFVIGARTDALANEGLEKALERAVAYKEAGADFIFAEAVRELSQYGAFVKATGIPVLANITEFGMTPMWTVEELKNAGVGLILYPLSAFRAANKAALNVFNTIRKEGTQKNVLDTMQTRAELYESIGYHAFEQKLDSLFSKHKS*