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SCN18_25_8_15_R2_B_scaffold_1607_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(2..997)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00036BF0E6 similarity UNIREF
DB: UNIREF100
  • Identity: 50.2
  • Coverage: 295.0
  • Bit_score: 284
  • Evalue 1.10e-73
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:EKN18294.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 262.0
  • Bit_score: 253
  • Evalue 3.00e-64
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 318.0
  • Bit_score: 246
  • Evalue 9.60e-63

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 996
ATGCAAAAAAAGGCTATTGGTCTAAAACGTCCGTGGCGCCCGGCTTTTAAGGCGTTCATGCTTATGAATGGGATTACGGTATTTTTCCTTGCTTTAAGCTTACAGCTTTCAGCCAACGGATTTGCCCAGAAGCGTATCAACCTTGAGGTAAGTAATGCTCCCCTTACGGAAGTGCTTCACCAGATTGAAAACAAAACGATATTCCGTTTTGTATACAGTAAAGACATGCTTGCTGACAAAGTAGTTTCTGCCGCTAAGTTTCGCAGAGCGCCTTTGGAAGAAGTGCTGAATCACTTACTGGGTAATATGCCGCTTACTTACAAAATGATCAATGACAGCCTGGTATCAATAGGCGAAAGGAAAATGGCTGTGCTTGCTGAAGAAGAGGCACAGGCTCCGGTTAAAGGCCAGGTAACGGATGAAAACGGCACCCCGCTGCCAGGCGTTTCAGTAACAGTAAAAGGTACCAGCAGAGGTACTATTGCTGATGAGAATGGCGCGTTTACGATTGATGCCAACCCCGGTGAAACAATAGAATTCAGTATTGTTGGGTACAAAGTTCAAACCATTAAACTGGGTAATGAAAAATCATTATCCATTCAGCTTTCAGCCGATGCGGCAGATTTAAATGCAGTGGTGGTTATCGGGTATGGTACGCAGAAAAAAGGCGATCTTACCGGCGCTATTACAAGCCTTAAAGCAAGCGATCTTACCTCAGGAGGTACTGTTAGTAATGCTGCGCAGGCATTGCAGGGCAGGGCTGCCGGTGTGATGGTTGTACAAAATTCAAAGGCACCCGGAGGAAGTATTTCAGTACGTGTGCGTGGTTCAAACTCTATCAGCAGTACCAATGAGCCATTATATGTGGTTGATGGTTTTGCCACTACCAGCGGTGTTGACCTGAACCCCAATGATATTGAATCTATGGAAATTTTGAAAGATGCATCTGCCACAGCTATATATGGCGCTCGTGGTGCAAATGGTGTAATCATCATC
PROTEIN sequence
Length: 332
MQKKAIGLKRPWRPAFKAFMLMNGITVFFLALSLQLSANGFAQKRINLEVSNAPLTEVLHQIENKTIFRFVYSKDMLADKVVSAAKFRRAPLEEVLNHLLGNMPLTYKMINDSLVSIGERKMAVLAEEEAQAPVKGQVTDENGTPLPGVSVTVKGTSRGTIADENGAFTIDANPGETIEFSIVGYKVQTIKLGNEKSLSIQLSADAADLNAVVVIGYGTQKKGDLTGAITSLKASDLTSGGTVSNAAQALQGRAAGVMVVQNSKAPGGSISVRVRGSNSISSTNEPLYVVDGFATTSGVDLNPNDIESMEILKDASATAIYGARGANGVIII