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SCN18_25_8_15_R2_B_scaffold_1607_11

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(14403..15098)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGF2_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 229.0
  • Bit_score: 362
  • Evalue 2.90e-97
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 74.2
  • Coverage: 229.0
  • Bit_score: 362
  • Evalue 8.30e-98
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEV97375.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 229.0
  • Bit_score: 362
  • Evalue 4.10e-97

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 696
ATGCAATCAACGAAAGCCAGGGTTTTACTTGCAGAAGATGATCTTTCTCTGGGCTATGTTATTAAAGATAACCTGGAACAGGAAGGCTACCGGGTAATGTTATGCCCTGATGGCGAAGATGCGCTGCAATCTTTTTTGAAGGAAGAATTCGATATATGTTTACTGGATGTGATGATGCCGAGCAAAGACGGTTTTTCCGTAGCAAAAAAAATCAGGCAGAAAAGCGATGTGGTTCCTATTTTGTTTTTAACCGCAAAATCAATGGAAGAAGACCGCCTGAAAGGATTTGCTACCGGTGCGGATGATTATATTACCAAGCCATTCAGCATGAAAGAGCTGCTGATGCGCATGGATGTTTTTTTAAGACGTACAAAAAAGCTGCATTCAGATAATGTTCAGGAGTTTAAGATTGGTAAGCTGCGCTTTTTATATACCGACCTGAAAATCTCGAATGGGACCGAAGAATCAAACCTCACACAAAAGGAAGCCGATCTGCTGAAGTTTTTTTGCGAACACCGTAATCATATTTTAAAGCGGGAAGAAGTGTTGTTAAATGTTTGGGGTAAGGATGATTATTTTCTCGGTCGTAGCATGGATGTATTTATCACCAAACTCCGCAAACATTTTAAAGCAGATCCGGAGGTAAATATTGAAACTATTCATGGTGTGGGCTTTCGGTTCAATGCACCGGAGTAA
PROTEIN sequence
Length: 232
MQSTKARVLLAEDDLSLGYVIKDNLEQEGYRVMLCPDGEDALQSFLKEEFDICLLDVMMPSKDGFSVAKKIRQKSDVVPILFLTAKSMEEDRLKGFATGADDYITKPFSMKELLMRMDVFLRRTKKLHSDNVQEFKIGKLRFLYTDLKISNGTEESNLTQKEADLLKFFCEHRNHILKREEVLLNVWGKDDYFLGRSMDVFITKLRKHFKADPEVNIETIHGVGFRFNAPE*