ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3207_10

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(6421..6786)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003687E7A similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 130.0
  • Bit_score: 129
  • Evalue 1.70e-27
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 130.0
  • Bit_score: 147
  • Evalue 6.40e-33
single stranded DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 130.0
  • Bit_score: 128
  • Evalue 8.10e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 366
ATGGAAATCGTAGGAAGATTAACAGCAGATGCAAAGGTGACTGAAACCAAAAATGGCGGGAAGGTTGTGAACTTCTCCCTTGCAGTCAATGACCGTTTCAAAACAAAGAGCGGTGAGCTAAAAGAGCAGGCTACTTATTTTAATTGCTCTTACTGGATCTCAGCAGGTATTGCTGAACATCTCCTTAAAGGCAGTTTGGTAGAAGTATCCGGAAGGGTAAGCGCCAACGCGTGGGTGAATGCAGAAGGTGAAGCTAAAGCAAGCCTCAATTTTCATGTAGACCGCATTAAGCTGCATGGAAAGGCAAACGGTGGTAACGCCGGTGAAGCCAATACTGAACCAGCCGCAGACGAAACCCCATTTTAA
PROTEIN sequence
Length: 122
MEIVGRLTADAKVTETKNGGKVVNFSLAVNDRFKTKSGELKEQATYFNCSYWISAGIAEHLLKGSLVEVSGRVSANAWVNAEGEAKASLNFHVDRIKLHGKANGGNAGEANTEPAADETPF*