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SCN18_25_8_15_R2_B_scaffold_3222_7

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(4972..5505)

Top 3 Functional Annotations

Value Algorithm Source
Isopentenyl-diphosphate delta-isomerase {ECO:0000313|EMBL:AEW03012.1}; EC=5.3.3.2 {ECO:0000313|EMBL:AEW03012.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 169.0
  • Bit_score: 237
  • Evalue 1.20e-59
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLD9_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 169.0
  • Bit_score: 237
  • Evalue 8.40e-60
isopentenyl-diphosphate delta-isomerase similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 169.0
  • Bit_score: 237
  • Evalue 2.40e-60

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 534
ATGTCATTTTACGACCCCGCTCATGAAATTATCCTTGTAAATGAGCTTGACGAGCAAACAGGCACCGCAGAAAAGATGGAAGCTCACCATAAGGCTTTATTACACAGAGCCTTCAGCGTATTCATTTTTAATACCAAAGGAGAAATGCTGTTGCAGCAAAGAGCCTTATCCAAATATCACAGTGCAGGCTTATGGACCAATGCCTGCTGCAGTCACCCCCGCCCTGGTGAGGAAACCATACATGGAGCAAAAAGAAGATTAAAGGAAGAACTGGGTTTTACCGCTGAGCTTAAAAAAGCTTTTGATTTTACTTACAGCGCCAGCTTTGATAACGGGCTTACCGAAAACGAATTTGATCATGTATTTACCGGGATATACGATGGACCGGTTGAACCCAACCCGGAAGAAGTGATGGATTATAATTATAAACCTATGGAAAAGATCAAAGAAGCATTGATTACCAACCCGCAGTTATATACCGCGTGGTTTATTATCGCTTTTCCTAAAATTGAGGAATACCTGGCAAAACGATAA
PROTEIN sequence
Length: 178
MSFYDPAHEIILVNELDEQTGTAEKMEAHHKALLHRAFSVFIFNTKGEMLLQQRALSKYHSAGLWTNACCSHPRPGEETIHGAKRRLKEELGFTAELKKAFDFTYSASFDNGLTENEFDHVFTGIYDGPVEPNPEEVMDYNYKPMEKIKEALITNPQLYTAWFIIAFPKIEEYLAKR*