ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3988_9

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(5392..6105)

Top 3 Functional Annotations

Value Algorithm Source
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 237.0
  • Bit_score: 385
  • Evalue 3.60e-104
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQM9_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 237.0
  • Bit_score: 376
  • Evalue 1.20e-101
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 237.0
  • Bit_score: 376
  • Evalue 3.30e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 714
ATGGAAATAATACCTGCAATAGATATTATAGATGGAAAATGTGTACGCTTAACACAGGGCGACTATGCACAAAAGAAAATTTACAATGAACGTCCGCTTGAGGTGGCGATGCAATTTGAGGACGCCGGTATAAAACGCCTGCATCTTGTAGACCTTGACGGGGCCAAAGCCGGGCAGGTAAAGAGCTGGAAGGTATTGGAAACCATTGCCGGCAAAACCTCTCTTGTTATTGATTTTGGCGGAGGTATAAAAAAAGAAGAGGATGTAAATATTGTTTTTAATTCAGGGGCGGCATTGGCTACCGTTGGTAGCATCGCGGTTAAAGATGAAAAGGAACTGGTAAGATGGTTTACTGTTTTTGGAGCAGATAAATTTTTGTTAGGCGCGGACGTAAAAGATGAAAAAATTGCGGTTGCCGGCTGGTTGGAAACTACTGATATATGGATTTACGATTTTATTGAAAAATATATTAATCACGGTGTAAAGCAATTATTTTGTACTGATGTGAGCAAGGATGGAAAACTCGAAGGCCCTTCAACGGAATTATATAAGAACATCATTCAGAAATTTCCTGGTCTGCATTTTATTGCAAGCGGTGGCGTAAGCAATATAGATGACCTGCATATGCTCAGCGATGCCGGCTGTAAAGGCGTTATTGTAGGTAAAGCGATTTATGAGGGGAGAATAAAGATCGGAGATTTGAAGAGTTTATAG
PROTEIN sequence
Length: 238
MEIIPAIDIIDGKCVRLTQGDYAQKKIYNERPLEVAMQFEDAGIKRLHLVDLDGAKAGQVKSWKVLETIAGKTSLVIDFGGGIKKEEDVNIVFNSGAALATVGSIAVKDEKELVRWFTVFGADKFLLGADVKDEKIAVAGWLETTDIWIYDFIEKYINHGVKQLFCTDVSKDGKLEGPSTELYKNIIQKFPGLHFIASGGVSNIDDLHMLSDAGCKGVIVGKAIYEGRIKIGDLKSL*