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SCN18_25_8_15_R2_B_scaffold_4064_6

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(3613..4191)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.5
  • Coverage: 192.0
  • Bit_score: 300
  • Evalue 9.40e-79
Peptide deformylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI75_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 74.0
  • Coverage: 192.0
  • Bit_score: 297
  • Evalue 9.60e-78
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 74.0
  • Coverage: 192.0
  • Bit_score: 297
  • Evalue 2.70e-78

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGATTTTACCAATTGTAGCGTACGGCGCACCGGTTTTAAGAACAGTTTGCAAGGATATTAACGCTGATTACCCGGGTTTAAATAAACTTATTGAAGATATGTGGGAAACCATGTATGCTTCGAGTGGCGTTGGCCTGGCTGCCCCGCAAATCAACAGGGAAGTACGGCTATTTGTAATTGACAGCAAGCAGATATTTGAAGGCATGGATGAAGAAGAAAAAAAGAAATATGCTGATGCTCCCGGTGTAAAACAGGTCTTCATCAATGCTCATATTAAAGAACTTGATGGCAAAGAATGGGCTTATAATGAAGGTTGCTTAAGTATTCCAAAAATAAGAGAAGATATTTACCGCAATGAAGTAGTTACCCTGGAATATGTTGACGATCAGTTCCAGGCACACACACAAACCTTTAAAGGTATTACCGCCAGAGTAATTTTGCACGAATACGATCATATAGAAGGCAAATTGTTTATTGACTATCTTAAACCATTAAAAAGGAGATTGATCAAGGGCAAGCTGGAAGACATTTCTAAAGGAAAGGTGAAAGTGGATTATAAGATGACGTTTCCCAAATAA
PROTEIN sequence
Length: 193
MILPIVAYGAPVLRTVCKDINADYPGLNKLIEDMWETMYASSGVGLAAPQINREVRLFVIDSKQIFEGMDEEEKKKYADAPGVKQVFINAHIKELDGKEWAYNEGCLSIPKIREDIYRNEVVTLEYVDDQFQAHTQTFKGITARVILHEYDHIEGKLFIDYLKPLKRRLIKGKLEDISKGKVKVDYKMTFPK*