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SCN18_25_8_15_R2_B_scaffold_3019_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(6013..6849)

Top 3 Functional Annotations

Value Algorithm Source
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 270.0
  • Bit_score: 304
  • Evalue 9.40e-80
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D0163 similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 266.0
  • Bit_score: 344
  • Evalue 5.80e-92
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 270.0
  • Bit_score: 304
  • Evalue 1.90e-80

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 837
GTGGTGCTCTTTCCTAATTGTAAGATTAATATTGGGCTTAACATCACGTCAAAACGCAGCGATGGTTTTCATAATCTTGAAACCATTTTTTATCCTGTACAATGGACTGATGTGCTGGAAATAACCAGCAACCAGCCTGCTGTCTCACCGGCAATACATTTATCCGGGCTGGATATACAGGGAAATCCTGCAGAAAATATTTGCTTAAAGGGATATGATTTACTTAAAAAGGATTTTCCGCAATTGCCTTCGGTAGATATTTACCTGCACAAAACCATTCCTTCAGGCGCAGGGCTTGGAGGCGGCTCTGCTGACGGCGCTTTTACCTTAAAGTTGCTGAATGCAAAATTTAACCTGGGGCTCACAGAAAAGCAATTGATAGAATACAGCCTGCAACTCGGCAGCGACTGCCCTTTTTTTATTTATAATAAGCCTTGCTTTGCAGGCGGCAGAGGAGAGGAGATACAGCCGGTATCACTGGATTTATCAGCTTATACTATTATGCTTGTTAACCCGGGCATTCATGTAAATACAGGTTGGGCTTTTTCAAATATACGTCCTTTGCAACCGGTTAAGTCAGTAAGGTATATTATTGAGCAGCCTCCGGCTACGTGGAAACATGAAATGATCAATGATTTTGAAGCTCCTGTGTTTGCAAAATATCCTGAGATAGCCGTAATAAAGCAAAAAATGTATGAGCAGGGTGCGGTATATGCATCTATGTCTGGCAGTGGTTCAACCGTGTATGGCATATTTGCTTCAGATGCTGTTGCGCCAATAGAATGGCCAAAACACTATAATACAGCAGTTAACCAGATAAAACTTATCTTGCACTAA
PROTEIN sequence
Length: 279
VVLFPNCKINIGLNITSKRSDGFHNLETIFYPVQWTDVLEITSNQPAVSPAIHLSGLDIQGNPAENICLKGYDLLKKDFPQLPSVDIYLHKTIPSGAGLGGGSADGAFTLKLLNAKFNLGLTEKQLIEYSLQLGSDCPFFIYNKPCFAGGRGEEIQPVSLDLSAYTIMLVNPGIHVNTGWAFSNIRPLQPVKSVRYIIEQPPATWKHEMINDFEAPVFAKYPEIAVIKQKMYEQGAVYASMSGSGSTVYGIFASDAVAPIEWPKHYNTAVNQIKLILH*