ggKbase home page

SCN18_25_8_15_R2_B_scaffold_3887_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 1246..2013

Top 3 Functional Annotations

Value Algorithm Source
HEAT domain containing protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZ63_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 247.0
  • Bit_score: 320
  • Evalue 8.30e-85
HEAT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 247.0
  • Bit_score: 320
  • Evalue 2.30e-85
HEAT domain containing protein {ECO:0000313|EMBL:ACU02545.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 247.0
  • Bit_score: 320
  • Evalue 1.20e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 768
ATGGCTTTTTATGATTTAACCAAACAGCAGCGGATAAAAAAAGTTGATCTGATCAATAGTATAATCTGTGATGAACTAAATGCCGATGCTTATCGGAAGACCTATACATATTTTTCTAACCCCGATACTTATATCAGGAAAGCAGCCTACATATCTGTAGGGAGGATTTACTTTGAAAGAAAAGAGTATCAATTTAAAATTATAAAAATTTTGACTGGTTGTTTAAAGCACAAAGATTTTAAAGTGCGGCAAACAGCTATAAATGCTGCAGGCGAGATTGGTAAAAAAAACTTTAAAGTCGTAGCGCATATTTTTGATGCAGGATTATTTGATGAACATCATTCACCGCGTAATGCTGTAATCGGTTCTGTAAAAAAGATGGGGCAGGTAAATCCTGTGCCGGTACTATCCTGGGCGAAAAGGTATCTTCATCATGATGACAGGGAAATACGAAGAGAAATTTGCCATGGTATTGAATTAAGAGGAAGAACGCATCCGGGAGATATTTTGCCATTATTAAAGGAGTTGCAGTATGATACAACTGCGCGGGTAAGAACAACACTGGTGCATGTTATAGGACAAATTGCTTATAAGAAAGGTTGCCTTGAAATTGTTGTTGCTGAGCTTAACAGGTGGGAGAATCAATTGTTAGTGCAGGAGGCTTTAATAGAGATTGTTGATGTGCATCACAGGTATAGAACTTTTGCTGCATTAACACAAAAGCAAGCTGCAGCATATGTAGCCAGGCACAGTAAAATTAAGATATAA
PROTEIN sequence
Length: 256
MAFYDLTKQQRIKKVDLINSIICDELNADAYRKTYTYFSNPDTYIRKAAYISVGRIYFERKEYQFKIIKILTGCLKHKDFKVRQTAINAAGEIGKKNFKVVAHIFDAGLFDEHHSPRNAVIGSVKKMGQVNPVPVLSWAKRYLHHDDREIRREICHGIELRGRTHPGDILPLLKELQYDTTARVRTTLVHVIGQIAYKKGCLEIVVAELNRWENQLLVQEALIEIVDVHHRYRTFAALTQKQAAAYVARHSKIKI*