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SCN18_25_8_15_R2_B_scaffold_3887_8

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 7288..7830

Top 3 Functional Annotations

Value Algorithm Source
Exporter of the RND superfamily protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI3_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 181.0
  • Bit_score: 195
  • Evalue 3.70e-47
RND transporter {ECO:0000313|EMBL:KIC89679.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 181.0
  • Bit_score: 198
  • Evalue 4.70e-48
RND superfamily exporter similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 181.0
  • Bit_score: 195
  • Evalue 1.10e-47

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGTGGAAAAAACTCGGGAAGTTTATTGTAAGAAACCGGCTTGTGCTTTTGATTGTATTGCTGCTTTCTACAGCATTCATGTTATACCATGCATTAAAAGTTACCATCAGTTACGAATTTGTAAGAACCATACCTGTTGATAATCCACTTTACCAGCGATACCTTGCTTTTAAAAAACAATTTGGCGATGACGGCAACACATTGGTGATCGGGTTTACAAAAAATGATCTTTTCAAAAAAGCAATTTTTGATGACTATACTGCTTTATGCAATAACCTGAAAAAAGTTGATAAAGTAGAGAGTGTGCTGAGCGTAGCTAATGCCATCAATCTTAAAAAAAATGACAGCACGCAAAAGCTGGAGGTAAAGCCTGTTTTCCGGGGGGCGTTGGCATCCCAGCAGGAAATTGATAGTGCTGTTCAGCTATTTCAGTCGCTGCCTTTCTATAAGGGATTATTGTATAACCCTGAAACCAACGCTTATCTTATTGCCGTAAGAATTAATAAAGATGTGCTTGCTTCAAAAGCAAGGGAAAAAGTTATT
PROTEIN sequence
Length: 181
MWKKLGKFIVRNRLVLLIVLLLSTAFMLYHALKVTISYEFVRTIPVDNPLYQRYLAFKKQFGDDGNTLVIGFTKNDLFKKAIFDDYTALCNNLKKVDKVESVLSVANAINLKKNDSTQKLEVKPVFRGALASQQEIDSAVQLFQSLPFYKGLLYNPETNAYLIAVRINKDVLASKAREKVI