ggKbase home page

SCN18_25_8_15_R2_B_scaffold_4271_3

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 2515..2949

Top 3 Functional Annotations

Value Algorithm Source
SOS response UmuD protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK11_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 142.0
  • Bit_score: 194
  • Evalue 5.10e-47
SOS response UmuD protein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 142.0
  • Bit_score: 194
  • Evalue 1.40e-47
SOS response UmuD protein {ECO:0000313|EMBL:AEW02949.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 142.0
  • Bit_score: 194
  • Evalue 7.10e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 435
ATGGAGGAGAAAGTTTTTTATAAATCCGGTTATAACGGAACAAAAAAATTCAGCCAGTGGGATGTGGAGCATTCGGATGCTACAGGATTCGGAGCTGCTGCAGATGATTATATGGAACGCAGTATTGATTTGAACGAAGAATTGATGAGAAATAAACCCGCTACATTTATAATGCGTGTAGGCGGCGACGCTATGATTGATGCAGGTATTTCCAATGGTGATATTGTAATAGTAGACCGGTCGGTGAAGGCAGCCAATGGTAAAATTGTGATTGCTGTGCTCAATGGCGAAATGTTGATACGGCGGTTAGAAAAAACTTTTAACAAAACAAGGCTTATTCCTGAATGCAAAAATCTTTCACCGATCGACGTTGATGTATCGGGAGCAGATTTTGCCGTGTGGGGCGTGGTTACGTATTGTATACATGCATGTTAG
PROTEIN sequence
Length: 145
MEEKVFYKSGYNGTKKFSQWDVEHSDATGFGAAADDYMERSIDLNEELMRNKPATFIMRVGGDAMIDAGISNGDIVIVDRSVKAANGKIVIAVLNGEMLIRRLEKTFNKTRLIPECKNLSPIDVDVSGADFAVWGVVTYCIHAC*