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SCN18_25_8_15_R2_B_scaffold_3787_1

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(2..553)

Top 3 Functional Annotations

Value Algorithm Source
Sel1 domain protein repeat-containing protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BQR6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 127.0
  • Bit_score: 99
  • Evalue 2.80e-18
Sel1 domain protein repeat-containing protein {ECO:0000313|EMBL:EIJ33709.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.2
  • Coverage: 127.0
  • Bit_score: 99
  • Evalue 4.00e-18
TIR protein similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 142.0
  • Bit_score: 95
  • Evalue 1.50e-17

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGGACGGTCTTGTTTTTGTCAGCTATTCCAGGGATGATAAATCACGTGTAGAAAGATTGGTTAATTACCTGGCGGAAAATAATATACCGTTATGGTGGGATGCAGATTTGCAAGGAGGAGATAATTTTAGTAATGTTATATCGGATAAAATAGAAAAGGCAGCTTGTGTTATTGTGGTATGGTCTAAAACATCTGTAGTTAAAGACTGGGTTAGATCAGAAGCTGATGAAGCGAGAAAGAGGCATATATTTATGCCTGTATTGCTCGATGCCGATATTAAAATACCCAAACCATTTGATATTTATCATCATTATAATTTTACTGATGAAAATTTTATATCAGGAAAGGAAATCGAAAAGATGCTTAGAGCTCTTGTCAAGATTATTAAATATGGGAAACCGGTGAATGTGTATGTTGAAGAGTTGTCAAGCGGCTGGTCAATAAACCGGGCAATTAGTGCAACTGACGAAGTCCGGGAGTTGGTTAATACATTGCGGTCTATAACAGAAATTATGACACTTGATACGCAGGCAATAAGGGATATAAGGTTT
PROTEIN sequence
Length: 184
MDGLVFVSYSRDDKSRVERLVNYLAENNIPLWWDADLQGGDNFSNVISDKIEKAACVIVVWSKTSVVKDWVRSEADEARKRHIFMPVLLDADIKIPKPFDIYHHYNFTDENFISGKEIEKMLRALVKIIKYGKPVNVYVEELSSGWSINRAISATDEVRELVNTLRSITEIMTLDTQAIRDIRF