ggKbase home page

SCN18_25_8_15_R2_B_scaffold_4622_10

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 10821..13052

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTD3_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 741.0
  • Bit_score: 679
  • Evalue 3.50e-192
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 741.0
  • Bit_score: 679
  • Evalue 9.90e-193
TonB-dependent receptor {ECO:0000313|EMBL:ACT96497.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 741.0
  • Bit_score: 679
  • Evalue 4.90e-192

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2232
ATGCGGATGTGTTTTAAGCTGGCCCTGATCGTTATCTGTCTATTATTTACCCTGCCGTTGTTAATGGCGCAATCCGGCAACCGGGCTGGTATTTTCATTACAGGGAAAATTACAGATTCTGCTACTCACAGCCCGGTCATGTATGCTACCATCACATTATTGAAACAGGATTCTGCTGTGAGCTCAGCTTATTCAGGTGAGGAAGGCAACTTCAGCATACAGGTACAGCAGGCAGGCATATATATTTTAGAAATAACATCCGTAGGCTATGATACACGCCATGTTGATATCAATCTTAATACAACAGGTAATTCATTTTCAGCAGGTAACATTCTTTTGACAAAATCTGCCAAAAGCCTGCAGGAAATAACCGTTACCGGAAGAAAAAAACTTATCGAGTTACGCCCTGGTATGCTCATTTATAATGCAGAAAACGATCTGTCTGTTAAAGGAGGAACCGCTGCAGATGTATTGCGTAAAGCCCCTGTTTTAAATGTAGACGCGCAGGGTAATGTCAGCCTTCGCGGCAGCCGTAATTTAAAAATACTTATTGATGGTAAATACTCAGGGCAGATAGCCCGCAGCCCGGCTGATGCATTGAATATGATGCCTGCCAATATTATTAAATCAGTGGAAGTAATTACAACCCCTTCTGCAAAATATGATGCAGAAGGCGCGGCAGGTGTAATAAACATCATTACAAAAAAAAGCAGGCAGAGCGTGAGCGGCGCACTGGAATTGGGTGCAAGCAATCTTGAGCAGGTTTTTAATCCACGCATTGCCGTTAACAGCAACAAATGGAGCACGAGTGTGCATGGTCACCTGCATAGACTAAGACGTAAGGAAGCCTATGCTGCAAACCGCATACAATACAACAACGGCTCACCCTCACTGTTGCTGGAGCAGGAAATGAACAGTGATAACGCCGCGCCGCATGGCTCAGGAGATATTGCAGTAACCTATACTGCAGATTCTTCTACCGAAATAAGTTTTGGTGCAAATGTTTGGTTTGGCAATTGGCCACAGGACAATAATATACTTACCACAGTGCGCCAGCCCGGCGGTACTATTACTGAACAGTATAAACAAACTACGGATGCCGCAGAAAATTATGTTGGAGCTGATCTGAATCTTGCCTATAGCAAAAAATTTAAAAAGCCGGGACAGGAAATAACATTGCTGGCGCAATTTTCTCCCAATAAAAGCCGTGATCCTTATCACATGTTACAGCATGACAACCACGGTATCCGGTTGTACCAGGAGTTAAATAATAATTTAGCTAAAAGCCGCGAATGGACAGTGCAGGCCGATTATCTCCATCCATTTTCAAATAATGGCATATTTACTTTGGAGAGCGGCTTAAAAATGATCATCAGGAATGCCTCAAGCCGCTATAATGTTACCGCCGCGGAAAACCAGGAAGCATTAGAACCCGTGCCTTCCCGTTCTGATGTTTTTACATACAGCCAGGATGTTTGGGCAGGCTATAGTATGCTGAAAGCAAACCTTAAAAAGAACTGGTATGCAGAAGCAGGCGCACGCCTGGAACTGACTTCTTTTAATGGTGATATTGAGCGGGCGGCAACAAAGTTTGATAATCATTTCACCAATCTTATTCCTTCGGCAACGGTATCAAAAAAAATTAATGACAATCAAACATTTTCATTAAGCTATACACAAAGGCTTACCCGCCCGTATATATGGGACCTTAATCCTAATATTAATGCAAGCGATCCCAAAAATATATCAACAGGCAATCCCGACCTGAAACCCGAAATAGCGCACCAGGCCGAATTTACATACGGCTTCTATCCCACATCCGCTTTCTTTTTAAATACAGCCCTGTTCTGGAAACAAACCAATAACGCTATTGTGGAATTTACGGCTGTAGACGATGATGGTATTGCCACCACCAAAAAGCAAAATCTTGCCGCCAATAAAACATACGGGTTAAACCTTTCGGCAATGGCTACCCTAACCGATTGGTGGAGCACCAACGGGAACCTGAACCTTGAATACCTCGATTACAGCAGCGATGCATTGCAGGTTTTAAGCAAAGGCTGGGCAACACATGTTAATCTCAACACTACCTTCAAACTTCCCAATAGTTTTTCCATTCAGGCCTTTGGGGAAATTAATACCCGCAAAATAATGCTCCAGGGCTCTGAATCCTTTATTTACTATTACAGCATTGCATGCAAAAAAGAATTTCCGGCAAAAAAGATTTCCCTT
PROTEIN sequence
Length: 744
MRMCFKLALIVICLLFTLPLLMAQSGNRAGIFITGKITDSATHSPVMYATITLLKQDSAVSSAYSGEEGNFSIQVQQAGIYILEITSVGYDTRHVDINLNTTGNSFSAGNILLTKSAKSLQEITVTGRKKLIELRPGMLIYNAENDLSVKGGTAADVLRKAPVLNVDAQGNVSLRGSRNLKILIDGKYSGQIARSPADALNMMPANIIKSVEVITTPSAKYDAEGAAGVINIITKKSRQSVSGALELGASNLEQVFNPRIAVNSNKWSTSVHGHLHRLRRKEAYAANRIQYNNGSPSLLLEQEMNSDNAAPHGSGDIAVTYTADSSTEISFGANVWFGNWPQDNNILTTVRQPGGTITEQYKQTTDAAENYVGADLNLAYSKKFKKPGQEITLLAQFSPNKSRDPYHMLQHDNHGIRLYQELNNNLAKSREWTVQADYLHPFSNNGIFTLESGLKMIIRNASSRYNVTAAENQEALEPVPSRSDVFTYSQDVWAGYSMLKANLKKNWYAEAGARLELTSFNGDIERAATKFDNHFTNLIPSATVSKKINDNQTFSLSYTQRLTRPYIWDLNPNINASDPKNISTGNPDLKPEIAHQAEFTYGFYPTSAFFLNTALFWKQTNNAIVEFTAVDDDGIATTKKQNLAANKTYGLNLSAMATLTDWWSTNGNLNLEYLDYSSDALQVLSKGWATHVNLNTTFKLPNSFSIQAFGEINTRKIMLQGSESFIYYYSIACKKEFPAKKISL