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SCN18_25_8_15_R2_B_scaffold_7964_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 1218..1967

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL87_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 248.0
  • Bit_score: 391
  • Evalue 6.40e-106
Transcriptional regulator {ECO:0000313|EMBL:KIC96192.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.7
  • Coverage: 246.0
  • Bit_score: 393
  • Evalue 1.80e-106
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 248.0
  • Bit_score: 391
  • Evalue 1.80e-106

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 750
ATGACAAAGAGAGCCATTATAATAGATGATGAAAGACTTGCAAGAACTGAATTAAAGAAACTGTTGCAGGATCACCCTGAAATTGAAGTAATAGCAGAAGCCGCAAACGCTAATGAGGGAATTGAAAAAATTGAGCAGATGACACCTGATCTGGTTTTTCTTGATATACAAATGCCGGGCAAAACCGGGTTTGATTTATTAACGGAGCTGGATAAGCTGCCACAGGTAATATTTACTACAGCTTATGATGAGTATGCCCTGAAAGCATTTGAAGTGAATGCGCTTGATTATTTACTGAAGCCTGTAGAGCCTAAAAGACTTGCTGATGCTATACAAAAATTAGAAGACAGTGATGAGCGGGAACCGGTTATATCAAACCTCAATACCCAGGCAAATGTGCCTAACCGGGGTATACTCGGAGAAAATGACCAGGTATTTGTGAAAGATGGAGAACGCTGCTGGTTTGTAAAACTAAATGAGATCCGCTTGTTTGAAAGTGTTGGTAATTACGCGAAAGTGTTTTTCAGTACGCACAAACCATTGATATTAAAATCACTCAATGCCCTGGAAGAGCGGCTTGACGAAAAAGTTTTCTTCCGTGCCAACCGCAAACATATGGTAAACCTGAGAATGATTGAAAGAGTAGAGCCGTATTTCAATGGAGGTTTACTGCTCGAAATTAAAGGTGGCGAAAAAATAGAAGTGAGCAGGAGACAGGCAGTGAAGTTTAAGGAGATGATGAGCCTGTAG
PROTEIN sequence
Length: 250
MTKRAIIIDDERLARTELKKLLQDHPEIEVIAEAANANEGIEKIEQMTPDLVFLDIQMPGKTGFDLLTELDKLPQVIFTTAYDEYALKAFEVNALDYLLKPVEPKRLADAIQKLEDSDEREPVISNLNTQANVPNRGILGENDQVFVKDGERCWFVKLNEIRLFESVGNYAKVFFSTHKPLILKSLNALEERLDEKVFFRANRKHMVNLRMIERVEPYFNGGLLLEIKGGEKIEVSRRQAVKFKEMMSL*