ggKbase home page

SCN18_25_8_15_R2_B_scaffold_7989_5

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(3144..3749)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 type transporter n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S0W1_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 201.0
  • Bit_score: 320
  • Evalue 8.50e-85
Multidrug ABC transporter permease {ECO:0000313|EMBL:KIC61316.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 201.0
  • Bit_score: 322
  • Evalue 2.40e-85
ABC-2 type transporter similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 201.0
  • Bit_score: 292
  • Evalue 5.40e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 606
GATCTGAATGGCTCACTCAACTTCATTCCGGGTGTGATTGCTTTGATATTTATGATTGTGAGCACCGCATTGACTTCTGTTGCAGTAGTGCGTGAGAAAGAATTGGGCACAATGGAGATACTATTGGTGTCGCCCTTTAAGCCGATAATGGTATTGATTGCGAAAGCAGTTCCTTACCTGGTGCTGTCGCTCATTGATTTTATCATCATCCTGTTGCTTGCCGTATTCTTTTTGAATATAGAAATACAGGGCAGCCTGGTACTGATCTTCGCTGAAAGTATCCTCTTCATCATAACCTGTCTTTCACTGGGTTTGCTGATTTCCAATGTTACCGCTTCGCAGCAAACGGCAATGCTGATTTCTATGATGGGAATGATGCTGCCTACCATGTTGCTTACAGGTTTTATGTTCCCGTTGGAAAATATGCCCAAAGCGTTTCAGTGGTTTTCCTATATCGTTCCGTCAAAATATTACTATACTATTATAAAAGGCGTGATGCTGAAAGGGGTTGGCTTCAGTTATGTATGGGAAGAAACGCTTATTCTGGCAGGAATGGCATCAGGGTTGTTGTTTGTGGCATTGAAGAATTTTAAAATTAGACTTTAA
PROTEIN sequence
Length: 202
DLNGSLNFIPGVIALIFMIVSTALTSVAVVREKELGTMEILLVSPFKPIMVLIAKAVPYLVLSLIDFIIILLLAVFFLNIEIQGSLVLIFAESILFIITCLSLGLLISNVTASQQTAMLISMMGMMLPTMLLTGFMFPLENMPKAFQWFSYIVPSKYYYTIIKGVMLKGVGFSYVWEETLILAGMASGLLFVALKNFKIRL*