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SCN18_25_8_15_R2_B_scaffold_9606_2

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10_40_9

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 1346..3142

Top 3 Functional Annotations

Value Algorithm Source
WD-40 repeat-containing protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468D0_METBF similarity UNIREF
DB: UNIREF100
  • Identity: 25.1
  • Coverage: 606.0
  • Bit_score: 215
  • Evalue 8.80e-53
High-affnity carbon uptake protein Hat/HatR similarity KEGG
DB: KEGG
  • Identity: 25.1
  • Coverage: 606.0
  • Bit_score: 215
  • Evalue 2.50e-53
High-affnity carbon uptake protein Hat/HatR {ECO:0000313|EMBL:AKB51127.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 25.1
  • Coverage: 606.0
  • Bit_score: 215
  • Evalue 1.20e-52

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10 → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1797
TTGTCGCTTTTAACTGAAGAGTTATTAGAGCTTCCAACCGAAGATAACAGTTACAGAAAAATAGTGTTTTCTCCTGATGGAAAATGGTTATGCAATGATGTTTACAATCCTAAAAAGATTTGGAATCTTTCCAACCAAAGTATTTTTGAATTTCTTAAAAATGAAAGGCAAATTTTAAAAATCAGTTTTTCCCCTGATAGTAAATGGATACTTGTCAATACTTTCGAAGGTGTCAAGGTATGGTCTCTTGATGATGGTAGGTTACTTGATTTTTCAAAGATTTACAAACATATGAATAATGCATATTTTTCTCCTGATGGAAAACTTTTGATAATTGGAACCAATGATGGAACTTATAAAATAGTTTCTCTCGCAGAAAATATATCCATTGACTTTTTAAAAAACGAAAAAGATATTCAACAAATATTATTTTCTCTGGATGGAAAATGGATTGTTTTGAAAAATCGGGATAGCATAAGCAAATTATATTCCACCCCAGATCGAAAATTTATTGATCTTCTAAAAGATGAAAAAGATATTCAGCAAATTTCTTTTTCACCAGATAACAAATGGTTTGTAACAAGAACAGGTAAAAACTCCACTAGAATTTGGTCTATTGATCAACAACTAAAATATACTTTCTTGGAGGAGTCAACAGGCATAAAAAACATCCATTTTTCATTAAATGGAAAATACGCCATTGTAACGAACGGGGAAATAGTTGACAAAGTATGGTCACTTCCAGAAAATAATAATTATGTTATTCTAAAAGATGATTCAGGCATTAGTTCCTTTGACGTTTCGCAAGGCGAAAAATGGCTTGTAACCAAATGCAAAAATGGAGTTAACAAGGTCTACAGATTCCCTCAAATGTGTGAAGACTCTTTTTTTATTAATCACAATTACACCCCTCATACTTCAAGTTTTTCTCCTGACGGAAAATGGTTGATTACAAGCGAAGGAGGGTATAGGCAACAAATATGGGGGTTAACTGAAAAAAGAATAGTCCATGGAGGTAGAGACTTTGAGAAAATTGACTTTTCACCTTCTTGTAAATTAGCATTGATTAAAACTATTTTTGGGCATATGATTTTGGAATTACCAGGGTTAAATTACCATAAAATATTCAACAGCGAAAAATACATCTATGGTTCCGTATTTACAAATAATGATGAGGCTCTCTTAATGGCTGATAGCGGCAGAATTAAACTATACGCTATTTCTGACAGCAAATTTACCGTTCTTTTGCCGGAAGAAAAACCAATTCTATTTGCATCATTTTCTTTAGATGGAAAATTTGCGCTAATTGAAACAACAGATCAAATGGTAAAAGTAGTAAGTATACCAAATGGCAAAATAATGAGTGTATTAAAAATCAAAGATAATATAAGACGCGCAGACTTTTACTCCGATGGTAAGTGGTTAGTTATAAGTAGCGAAGATGGATTGAAAAAAATTTTTGATTGCACTACTGGAAAATCTCTGATTTTCTTGAATAATGAAAATAATATTAAAAACGTGAATTTTTCTTCTGATGGAAAATGGCTAACGACTATAAATTTGATGGGATCGGGAAAAATATGGTCGCTTGAAGAAGGGAAATTTTATGACTTTTTAAAAATGGAAAAAAATATAGAAACCATAACCTTTTCCCCGGATAACAAATGGCTTTTAACAAAAAATAAAGATAGTATTTGTAAGATATGGTTACTTTCTGAAGGAAAGTCGTATGATTTTTTGTATCATGTCAATGCGAATAATCTTTTCTTTTCTCCAAAAGGGAATTGGTTGGTATAT
PROTEIN sequence
Length: 599
LSLLTEELLELPTEDNSYRKIVFSPDGKWLCNDVYNPKKIWNLSNQSIFEFLKNERQILKISFSPDSKWILVNTFEGVKVWSLDDGRLLDFSKIYKHMNNAYFSPDGKLLIIGTNDGTYKIVSLAENISIDFLKNEKDIQQILFSLDGKWIVLKNRDSISKLYSTPDRKFIDLLKDEKDIQQISFSPDNKWFVTRTGKNSTRIWSIDQQLKYTFLEESTGIKNIHFSLNGKYAIVTNGEIVDKVWSLPENNNYVILKDDSGISSFDVSQGEKWLVTKCKNGVNKVYRFPQMCEDSFFINHNYTPHTSSFSPDGKWLITSEGGYRQQIWGLTEKRIVHGGRDFEKIDFSPSCKLALIKTIFGHMILELPGLNYHKIFNSEKYIYGSVFTNNDEALLMADSGRIKLYAISDSKFTVLLPEEKPILFASFSLDGKFALIETTDQMVKVVSIPNGKIMSVLKIKDNIRRADFYSDGKWLVISSEDGLKKIFDCTTGKSLIFLNNENNIKNVNFSSDGKWLTTINLMGSGKIWSLEEGKFYDFLKMEKNIETITFSPDNKWLLTKNKDSICKIWLLSEGKSYDFLYHVNANNLFFSPKGNWLVY