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SCN18_25_8_15_R2_B_scaffold_194_12

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12_66_16

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: 13425..14639

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide export system permease protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IK05_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 399.0
  • Bit_score: 553
  • Evalue 1.20e-154
Lipopolysaccharide export system permease protein LptF {ECO:0000313|EMBL:AKH42596.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 410.0
  • Bit_score: 588
  • Evalue 4.70e-165
lipopolysaccharide export system permease similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 399.0
  • Bit_score: 553
  • Evalue 3.40e-155

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Taxonomy

SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
GTGTTCCGGCTCACGATCGTGCCGATGTTCGGCGTGTTCCTGCTCGCCGCTTCTCTGCTCATGCTGGAGAAGATGCTGCGGCTGATGGAGTTCGTCTCTTCCGAAGGCGGGCCGGTGACCATCGTCTTCCGCATGCTGGTCAACCTCATCCCGGAATATGCCGGGCTGGCGATTCCCCTGGGGCTGATGCTGGGCATCCTGTTCGCCTTCCGCAAGCTGGCGACGACCAGCGAGCTGGATGTCCTGCGCGCCGTGGGGTGGAGCTATACCCGCCTGCTCAGGGTCCCCTATATGATCACGCTGGTGCTGCTGGCGCTGAACCTGCTGATCGTGGGGTATTGGCAGCCGCTGGCACGGTACGGTTACGAGCAGCTCGATTTCGAGCTGCGCTCGGGCGCGTTGGGCGCGGCGATCAAGGTGGGGGAGTTCACCACGCTCAAGGACAAGGTGGCGCTGCGGATCGAGGAAAGCCAGGATGACGGCCGCCGCCTGATCGGCATCTTCGCGCGGGTGGCGAACGACAAGGGGCAGGTCCTGTCGATCTCCGCGCGCGAAGGGCGCTTCCTGGCCGACGCCGAGAACCGCGACACGATCATCTTCCGGCTGACCGACGGCACGATCGTGCAGGAGATGCCCGGCGAAGCCCCGCGCGTGCTGAGCTTCGCGCGCGACGACCTGCCGATCGACCTGCCGCGCATCGAGGAATTCCGCGCCCGCGGTGACGAGAGCCGCGAATACCTGCTGCCCGAACTGCTCGAACTGGGTTGGCGCGACCAGAACGTGGCGCCGATCAAGCGAGTGGAGGGGCAGGCGGCGTTCAATTACCGGATCGTCGAAGTGGTGATGATGCTGATGCTGCCGCTGCTGGCGGTGGCCCTGGCGATCCCGCCCAAGCGCTCCACCTCCTCATTGGGCGTGTTCGTGTCGATCGTGATGGTGGTGGCCTATCACAAGGTCAACCAATACGGGCAGGAGGTGGCCACGCTGGGGCGGATAGACCCGCTGCTGGCGCTGTGGGGCCCCTTTGCCGTGTTTGCCGTGCTGATAGGCTGGATGTATTTCCAGGTCGCCTTCGTGCCCGGCGGCCAGGCGATCGGCGCCCTGGAATCCGTTTACGCCAAGCTGATCAAGCGCGTGCGAGCGCTGCTGCGCCGGCGCGACCGCACCGCATCAAGCGATCCGTCGATCGAGGAAGCAGCCGCCGGTGCTGTTTGA
PROTEIN sequence
Length: 405
VFRLTIVPMFGVFLLAASLLMLEKMLRLMEFVSSEGGPVTIVFRMLVNLIPEYAGLAIPLGLMLGILFAFRKLATTSELDVLRAVGWSYTRLLRVPYMITLVLLALNLLIVGYWQPLARYGYEQLDFELRSGALGAAIKVGEFTTLKDKVALRIEESQDDGRRLIGIFARVANDKGQVLSISAREGRFLADAENRDTIIFRLTDGTIVQEMPGEAPRVLSFARDDLPIDLPRIEEFRARGDESREYLLPELLELGWRDQNVAPIKRVEGQAAFNYRIVEVVMMLMLPLLAVALAIPPKRSTSSLGVFVSIVMVVAYHKVNQYGQEVATLGRIDPLLALWGPFAVFAVLIGWMYFQVAFVPGGQAIGALESVYAKLIKRVRALLRRRDRTASSDPSIEEAAAGAV*