ggKbase home page

SCN18_25_8_15_R2_B_scaffold_1122_12

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12_66_16

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: comp(12638..13759)

Top 3 Functional Annotations

Value Algorithm Source
Rod shape-determining protein RodA n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y8P3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 372.0
  • Bit_score: 581
  • Evalue 3.80e-163
Rod shape-determining protein RodA {ECO:0000313|EMBL:AKH41630.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 367.0
  • Bit_score: 596
  • Evalue 1.60e-167
rod shape-determining protein RodA similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 367.0
  • Bit_score: 542
  • Evalue 7.20e-152

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1122
ATGAAGCTCGCCGTCCTCCCCGCCCCGCTCGCCGGCATTCCCTGGCGAGTCATCCTGCCGCTCACCCTGCTGGTCTGCTTCGGGGCGGCAGTGCTCTACTCCGCCGCCGGGGGCTCGCTTAAGCCTTATGCGCTGTCCCATGTGACGCGCTTTGCCCTGTTTCTCGTCATGGCGCTGGTGCTCTCGCACTTCCCGCGCGATCTGGTGCGGATCGCCGCCTATCCGGCCTATGCCGCCGTGCTGCTCCTGCTCATGGCGGTGGAAGCCATCGGCGCGATCGGCGGCGGCAGCCAGCGCTGGCTTACCCTGGGCCCGCTGGTGCTCCAGCCTTCGGAATTGATGAAGCCCACGATCGTGCTGGTGCTGGCGGCGTTCTATCATTCACTCCCGGCCGGATTGGTCACGTCCTGGCGCGCGCTGGTCCCGGCCGGGGTGCTGATCGGCTTTCCGATGGTGCTGGTGCTGCTGCAGCCCGATCTCGGCACCGCGCTGGCGATCGGCTTCGGCGGGGTGGTGATGATGTTCCTCGCCGGCATTCCGGCCAAATGGTTCGTCGGCGGCGGCCTCGCGGCGCTGATCGGGGCGCCGCTCGCCTATTTCTTCGCGCTCCACGACTATCAGCGCAAGCGGGTGACGACGTTCCTCGATCCCGAAAGCGACCCGCTGGGCGCCGGTTATCACATCACCCAGTCGAAGATCGCGATCGGCTCGGGCGGCGTGTTCGGCAAGGGCTTCGGCCAGGGTTCGCAAAGCCACCTCAACTACCTGCCGGAACCCCATACCGATTTCGTCTTCGCCACCATGGCCGAGGAATGGGGCCTCGTCGGCGGCCTGTTCGTGCTGCTGGTGTTCGGCATCGTGCTGCGCTGGGGCTGGACCGTGGCCCGCCGCGCGCCCGACCGCTTCTCGTGCCTGCTGGCCGGAGGCATGACGGCGACGATCTTCTTCTACGTGGCGATCAATCTGATGATGGTCACCGGCATGGCGCCCGTCGTGGGCATCCCCCTGCCATTCATGAGCCACGGCGGATCGTCGATGATGACCAACATGATCTGCATCGGCACTCTGATGATGGTCGAACGCTGGACTCGCAAGGCGGGCCACTCGGGCCTGGCCATCTAA
PROTEIN sequence
Length: 374
MKLAVLPAPLAGIPWRVILPLTLLVCFGAAVLYSAAGGSLKPYALSHVTRFALFLVMALVLSHFPRDLVRIAAYPAYAAVLLLLMAVEAIGAIGGGSQRWLTLGPLVLQPSELMKPTIVLVLAAFYHSLPAGLVTSWRALVPAGVLIGFPMVLVLLQPDLGTALAIGFGGVVMMFLAGIPAKWFVGGGLAALIGAPLAYFFALHDYQRKRVTTFLDPESDPLGAGYHITQSKIAIGSGGVFGKGFGQGSQSHLNYLPEPHTDFVFATMAEEWGLVGGLFVLLVFGIVLRWGWTVARRAPDRFSCLLAGGMTATIFFYVAINLMMVTGMAPVVGIPLPFMSHGGSSMMTNMICIGTLMMVERWTRKAGHSGLAI*