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SCN18_30_10_14_R5_P_scaffold_271_48

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(48826..49542)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034D6774 similarity UNIREF
DB: UNIREF100
  • Identity: 48.4
  • Coverage: 223.0
  • Bit_score: 207
  • Evalue 9.50e-51
Putative two-component response regulator (QseB/CopT-like) {ECO:0000313|EMBL:CCE01484.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 220.0
  • Bit_score: 205
  • Evalue 6.60e-50
two-component response regulator similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 222.0
  • Bit_score: 204
  • Evalue 3.00e-50

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Taxonomy

Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCGTGTCCTCGTCGTCGAAGACAATGCCGCGTTCTGCAGGCTGGTCGTGGAAGGCCTGGTGCGCGCGGGCTTCAGCGCCGACGAAGTGAATACGGCCGGCGCCGCACGGAAGGCAATTGCCACCGTCGACTATTCTGCCGTGGTGCTGGACCTCGGCCTGCCGGACGGCGAAGGCGTCGACCTGCTGCGAACACTGAGGTCGTCGACGCGCGCACTGCCGATCATCGTCACGACAGCACGGGACGGTCTCGATGACAGGGTGCTCGGCCTGCAGAGCGGGGCCGACGATTATCTCGTCAAGCCCTTCGCCATGGACGAACTCGTCGCCCGGTTGCATGCGGTGTTGCGCCGGATCGACCCGCCGTCGGAACAAACGCTGGAGGCGGGCAACGTTACGCTCGACCTCACCAATCGCCTCCTCAAGATCGGGAGCGACGTGCAGTCCTTGCCGGCGCGCGAGTTCGATTTGCTGGAGCTGCTGATGCGCAACCAGGGCCACGTCATCAAGCGCGAAGCCCTCGTCACTCAGATCTTCGGCAAGCATGGACATCAGGGCGACGGTGCGCTCGATGTCTATCTATGCCGGCTACGCAAGCTTTTCAGCGATGCGAACGCCACCGTACGGATCGACAACATTCATGGCCTTGGCTTCCTGTTGTTGGATGCCGGCGAGACGATCAGCCACGCGGCGGCAGCGCGTAGCCTGCGTCCTTGA
PROTEIN sequence
Length: 239
MRVLVVEDNAAFCRLVVEGLVRAGFSADEVNTAGAARKAIATVDYSAVVLDLGLPDGEGVDLLRTLRSSTRALPIIVTTARDGLDDRVLGLQSGADDYLVKPFAMDELVARLHAVLRRIDPPSEQTLEAGNVTLDLTNRLLKIGSDVQSLPAREFDLLELLMRNQGHVIKREALVTQIFGKHGHQGDGALDVYLCRLRKLFSDANATVRIDNIHGLGFLLLDAGETISHAAAARSLRP*