ggKbase home page

SCN18_30_10_14_R5_P_scaffold_583_20

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(16149..16643)

Top 3 Functional Annotations

Value Algorithm Source
RDD domain containing protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VIM3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 145.0
  • Bit_score: 148
  • Evalue 4.70e-33
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 52.1
  • Coverage: 144.0
  • Bit_score: 140
  • Evalue 2.80e-31
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 126.0
  • Bit_score: 189
  • Evalue 3.40e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_P_inoc_Stenotrophomonas_69_27 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGGCCAGCGTTCCTGACTCAGGTTCCGCCGCACCGCCGCCGCCACCCGTGTGGAATGCCCAGCCCGCGGGACAGGGCCAGGTTGCCTATGGCGGCTTCTGGATACGTCTCGTGGCGTACATCATCGACGCCATCGTGCTCAGCGTGGTCGTGGGCGCCATCGCCTCGGTCATGGGACTGAACATCTTCGATCCTGAGAGCGAAGCCGGTATGGACCCGACCCTGAACCTGATCTCGGTGATCATCGGCTGGCTCTATTTTGCGCTCATGGAAAGTTCCGAGCGTGGCGCTACGCTCGGCAAGATGGCGCTGGGCCTGCGCGTGGTGTCCAACAGTGGGCAGCGCCTCAGCTTCCTGAACGCCACGGGCCGTTACTTCGCCAAGATCCTGTCGGCCATCATCCTGTGCATCGGCTTCCTGATGATCGCCTTCACCGATCGCAAGCGCGGCCTGCACGACATGATCGCCAGCACCCTGGTCGTCAAATACCCCTAA
PROTEIN sequence
Length: 165
MASVPDSGSAAPPPPPVWNAQPAGQGQVAYGGFWIRLVAYIIDAIVLSVVVGAIASVMGLNIFDPESEAGMDPTLNLISVIIGWLYFALMESSERGATLGKMALGLRVVSNSGQRLSFLNATGRYFAKILSAIILCIGFLMIAFTDRKRGLHDMIASTLVVKYP*