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SCN18_30_10_14_R5_P_scaffold_583_24

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(19450..19983)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RIMM_PARL1 similarity UNIREF
DB: UNIREF100
  • Identity: 48.3
  • Coverage: 178.0
  • Bit_score: 168
  • Evalue 3.70e-39
rimM; 16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 178.0
  • Bit_score: 168
  • Evalue 1.00e-39
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 177.0
  • Bit_score: 313
  • Evalue 1.30e-82

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Taxonomy

Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGTGAGGGGCGCGTCCTGCTGGGTGTCGTCGCGGCACCGCACGGTGTACGTGGCCTGGTGCGCATCAGGAGCTTCACCGAGGATCCGATGGATATCGCCGCCTACGGCGAGCTGTCGGACGAGACGGGGAAGAAGCAGTACCGGGTCGAGGCTCTCAGCGCCGTCAAAGGTGCAGTCCTCGCCCGGATCGAGGGCGTAGCCGATCGAACGGCGGCCGAGGCAGTGCGGGGTTTGCGGCTCTATGTGGAGCGCGAGCGGCTGCCGGCGACGGGCGAGCGGGAGTGGTACGAGGCGGACTTGATCGGTCTCGCCGCGGTCGGCCGGGATGGCCGGGATTGGGGGAAGGTCATGGCCTTCCACGATTTCGGTGCCGGGCTGACGATGGAAGTGTCGGGAGGCAGCGCATCGAGGCAATCGGTGATGCTGCCCTTCACCGACGAGGCGGTGCCCGAGATCGACGTCCCGGGCGGCAGGATTGTGGTCGATCCACCGGCGGGAGTGCTGCCGGGCGGGTCAACGAAGGAGGCGTAA
PROTEIN sequence
Length: 178
MSEGRVLLGVVAAPHGVRGLVRIRSFTEDPMDIAAYGELSDETGKKQYRVEALSAVKGAVLARIEGVADRTAAEAVRGLRLYVERERLPATGEREWYEADLIGLAAVGRDGRDWGKVMAFHDFGAGLTMEVSGGSASRQSVMLPFTDEAVPEIDVPGGRIVVDPPAGVLPGGSTKEA*