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SCN18_30_10_14_R5_P_scaffold_503_28

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(26181..27971)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion system ATPase n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PK54_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 581.0
  • Bit_score: 696
  • Evalue 1.30e-197
Type I secretion system ATPase {ECO:0000313|EMBL:EKS39905.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 581.0
  • Bit_score: 696
  • Evalue 1.80e-197
type I secretion protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 585.0
  • Bit_score: 691
  • Evalue 1.20e-196

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1791
ATGCGGCCTCCTGTTATTGGGGATCCACGGTCTGAATTGGCGAAGGTCTTGGCGACGTGCCGGTCGTCGTATGCCGGCGTCGCGGTGTTCACGGCCATCCTGAACGTCCTCTACCTGACCGGCTCGTTCTTCATGTTGCAGGTCTATGACCGGGTGCTGCCGAGCCGCAGCGTGCCGACCCTGGTCGGTCTCTGCGTCCTGGCGGGCGTGCTCTATGGTTTCCAGGCGCTGCTCGACATCCTGCGCAACCGGGTGCTGATCCGCATTGCCGGCGGGTTCTCCGAGCAGCTCGATGCCCGGGTCTACCACCTCCTCGTCAAACTGCCGCTGCGCGCGCCGGGCATGGGCAACTTCGAGCCGGCCCGCGATCTCGACCAGATCCGCGGCTTCATGTCGGGCGGCGGACCGGCCGCGCTCTTCGACCTGCCCTGGCTGCCGCTCTATCTCGGCATCTGCTACCTGTTCCACCCCCTGATCGGCGTCACTGCCACAGTGGGTGCCATCATCTTGGTCATCATTACGGCCCTGACCGAGATCAAGGTTCGCAAGCCGTCGATCGAGGTCTCGGCGCTTTCCGCGCAGCGCAACAGCCTCGCCGAAGCGAGCCGCCGTAATACCGAGGTCCTGCACGCCATGGGCATGGTCGGGCGTTTCTCCGCTCTGTGGGCGGAGAGCGGCCGACGCTATCTCGCCGTGCAGCAGCAGGCAGGCGACATCACCGGCGGCATGGGCGGCCTCTCCCGCGCGCTGCGCATGATGCTGCAGTCGGCGGTGCTCGCCGTGGGTGCCTATCTCGTCATTCACCAGCAGGCTTCGGCCGGTATCATCATCGCCGGTTCGATCCTGTCGGCGCGTGCGCTTGCTCCGGTCGAGGTGGTGATCGCGCAGTGGCGTGTCTTCGTCTCGGCGCGCCAGAGCTGGCGTCGTCTCAACAACCTGCTTGCCCGCATGCCGGTCGAGCCGGCGATGATGGAGTTGCCCAAGCCGCGCAACACGCTCGCCGTCGAAGGCATCAGCGTGGCGCCTCCGGGCTCCAACACGCTGGTCCTTCAGGATATCGCCTTCAACCTCAAGGCCGGGCAGGGGCTCGGCATCATCGGACCGAGCGCGTCGGGCAAGTCGACCCTGGTGCGGTCGATCGTCGGTGTCTGGATGATCGCGCGCGGCAAGGTACGGATCGACGGCGCATCCCTCGATCAATGGTCGCCCGACATGCTGGGGCAGCATATCGGCTACCTGCCGCAGGACATGGAATTGTTCGCAGGCACCGTCGCGCAGAACATCGCACGACTCGACCCCGAGCCGCCGTCGGACAGGGTCATCGCAGCGGCCCAGGCTGCCGGTGTCCACGAGCTGATCCTCGGCCTCTCCAATGGTTACGAAACGCAGATGGGCGAGGGCGGTGCCGCTCTTTCGGCCGGTCAGCGGCAACGTATCGGACTGGCGCGCGCCCTCTATGGCGATCCCTTCCTGGTCGTGCTCGACGAACCCAATTCGAGCCTCGACCACGATGGCGACGAGGCTCTGACGCGCGCCATCATGGGGGTTCGTGCTCGCGGCGGCATCGCGATCGTGGTCGCGCACCGTCCCAGTGCGCTGGCGGGGGTCGATAACCTGCTGGTCCTGCGTGCCGGGCGACAGCAGGCGTTCGGCCCGAAGGACACCGTGTTGCGGGAAGCGATGAAGGCTGCAGGGCCTGCCCCTGGGGCCGCCCCTGCACCTGCACCCGCACCGATGATGGCTCAGGGCGCTGCACCACAGCCGCTTCGCGTTCCTGGAAGGACACCCTAA
PROTEIN sequence
Length: 597
MRPPVIGDPRSELAKVLATCRSSYAGVAVFTAILNVLYLTGSFFMLQVYDRVLPSRSVPTLVGLCVLAGVLYGFQALLDILRNRVLIRIAGGFSEQLDARVYHLLVKLPLRAPGMGNFEPARDLDQIRGFMSGGGPAALFDLPWLPLYLGICYLFHPLIGVTATVGAIILVIITALTEIKVRKPSIEVSALSAQRNSLAEASRRNTEVLHAMGMVGRFSALWAESGRRYLAVQQQAGDITGGMGGLSRALRMMLQSAVLAVGAYLVIHQQASAGIIIAGSILSARALAPVEVVIAQWRVFVSARQSWRRLNNLLARMPVEPAMMELPKPRNTLAVEGISVAPPGSNTLVLQDIAFNLKAGQGLGIIGPSASGKSTLVRSIVGVWMIARGKVRIDGASLDQWSPDMLGQHIGYLPQDMELFAGTVAQNIARLDPEPPSDRVIAAAQAAGVHELILGLSNGYETQMGEGGAALSAGQRQRIGLARALYGDPFLVVLDEPNSSLDHDGDEALTRAIMGVRARGGIAIVVAHRPSALAGVDNLLVLRAGRQQAFGPKDTVLREAMKAAGPAPGAAPAPAPAPMMAQGAAPQPLRVPGRTP*