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SCN18_30_10_14_R5_P_scaffold_3946_3

Organism: SCN18_30_10_14_R5_P_Alphaproteobacteria_65_16

near complete RP 43 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 12 / 38
Location: comp(1524..2216)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RL1_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 224.0
  • Bit_score: 360
  • Evalue 6.50e-97
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 79.5
  • Coverage: 224.0
  • Bit_score: 360
  • Evalue 1.80e-97
50S ribosomal protein L1 {ECO:0000255|HAMAP-Rule:MF_01318}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 224.0
  • Bit_score: 360
  • Evalue 9.10e-97

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Taxonomy

Magnetospirillum gryphiswaldense_SCNpilot_P_inoc_Magnetospirillum_64_120 → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGACCCAGGGCAAGCGTTACAAGGCAGCGGCCACCACGGTCGACCGCGAGAAGATGTACTCCCTCGAGGAGGCGGTGAAGATCGTCAAGGCGAACGCCAAGGCGAAGTTCGACGAGACCATCGAGGTCGCGATGAACCTCGGCATCGATCCGCGTCACGCCGACCAGGCGGTGCGCGGCATGATCGAGCTGCCGAACGGCACCGGCAAGTCGGTGCGCGTCGCGGTGTTCGCGCGTGGCGCCAAGGCCGACGAGGCCAAGGCAGCCGGTGCGGATCTGGTCGGTGCGGAAGACCTCGCCGAGAAGATCAATGCCGGCGAGATGAACTTCGAGCGCTGCGTGGCCACGCCGGACATGATGGGCGTGGTCGGCCGTCTCGGTAAGGTGCTGGGCCCGCGCGGCCTGATGCCGAACCCGAAGCTCGGCACCGTGACGCAGGATGTCGCCGCGGCCGTGAAGGCTGCCAAGGCCGGCTCGATCGAGTTCCGCGCCGAGAAGGCCGGCATCGTGCACGCCGGCGTCGGCAAGGCCTCGTTCAGCGAGGAGGCGATCACCGCCAACGTGAAGGCGCTGGTGAACGCGATCAACCGCGCCAAGCCGAGCGGCGCCAAGGGTACCTTCATCAAGAAGGTGTCGCTGAGTTCGACGATGGGTCCGGGCATCAAGCTCGACCCGGCTTCCGCGCTGAACTAG
PROTEIN sequence
Length: 231
MTQGKRYKAAATTVDREKMYSLEEAVKIVKANAKAKFDETIEVAMNLGIDPRHADQAVRGMIELPNGTGKSVRVAVFARGAKADEAKAAGADLVGAEDLAEKINAGEMNFERCVATPDMMGVVGRLGKVLGPRGLMPNPKLGTVTQDVAAAVKAAKAGSIEFRAEKAGIVHAGVGKASFSEEAITANVKALVNAINRAKPSGAKGTFIKKVSLSSTMGPGIKLDPASALN*