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SCN18_13_7_16_R2_B_scaffold_3117_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 2..463

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 154.0
  • Bit_score: 272
  • Evalue 2.80e-70
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Microbacterium yannicii RepID=UPI000300B153 similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 151.0
  • Bit_score: 279
  • Evalue 1.30e-72
clpP2; protease subunit of ATP-dependent Clp protease similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 151.0
  • Bit_score: 263
  • Evalue 3.50e-68

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Taxonomy

SCNpilot_P_inoc_Microbacterium_67_17 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 462
GAGAGCCAGGATCCCGACCGCGACATCATCATGTACATCAACTCGCCCGGCGGCTCGTTCACGGCCATGACGGCGATCTACGACACGATGCAGTACGTCTCGCCGCAGATCCAGACGGTCGTCCTCGGCCAGGCGGCATCCGCCGCGGCCGTGCTCCTCGCCGCCGGCGCACCGGGCAAGCGTCTCGCCCTTCCCAACGCCCGCATCCTGATCCACCAGCCCGCCATGGGCGAGGCCGGTCACGGGCAGGCGTCGGACATCGAGATCCAGGCGAACGAGATCATGCGCATGCGCACATGGCTCGAGGAGACGCTGGCGAAGCACTCCAACCGCACCGCCGAGCAGGTGAACAAGGACATCGACCGCGACAAGATCCTGTCGGCCGAGGAGGCCGTGGTCTATGGTCTCGTCGACCAGGTCCTCACCACGCGCAAGCGTGGCCAGGCGGCGATCGGCTCGTAG
PROTEIN sequence
Length: 154
ESQDPDRDIIMYINSPGGSFTAMTAIYDTMQYVSPQIQTVVLGQAASAAAVLLAAGAPGKRLALPNARILIHQPAMGEAGHGQASDIEIQANEIMRMRTWLEETLAKHSNRTAEQVNKDIDRDKILSAEEAVVYGLVDQVLTTRKRGQAAIGS*