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SCN18_13_7_16_R2_B_scaffold_3174_2

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(991..1911)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 306.0
  • Bit_score: 546
  • Evalue 1.60e-152
RNA pseudouridine synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035ECEBE similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 306.0
  • Bit_score: 563
  • Evalue 8.80e-158
rlu; pseudouridylate synthase, 23S RNA-specific similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 304.0
  • Bit_score: 525
  • Evalue 9.80e-147

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 921
GTGGAGTCGCGCGCACTGCCGGTGCCCGATGGGCTCGACGGCACCAGGGCCGACGCCGCGCTCGCGAAGCTCCTGGGCTTCTCCCGGACGTTCGCCGCGGACGTCGTCGACGCCGGGGGCGTGAGTCTCGACGGCCGCACGGTGGGGAAGTCGGACCGTCTGCGGGCGGGCGCGTGGCTGGAAGTCTCGTGGAGCCCCAAGGCGGAGCCGCGCGTCGAGCCGGTCGATGTCCCCGATCTGGGGATCGTGTACGACGACGACGACATCGTGGTGGTCGACAAGCCGGCGGGCGTCGCGGCTCACCCGTCGCTCGGCTGGGAGGGCCCTACGGTGCTGGGCGCACTGGCCGCCGGGGGGTTCCGGGTCGCGACGACGGGCGCACCTGAGCGGCAGGGCATCGTGCACCGGCTCGACGTGGGCACCAGCGGACTCATGGTCGTGGCGAAGACCGAGCGCGCCTACACGGTCCTGAAGCGCGCGTTCAAGGAGCGCACGGTCGAGAAGATCTACCACGCCGTCGTCCAGGGGCACCCGGACCCGCTGAGCGGGACGATCGATGCTCCGGTGGGCCGGCATCCCACGCATTCCTGGAAGTTCGCGGTCACGCCCGATGGCAAGGACTCCGTGACCCACTACGAGACGCTCGAGGATTTCCCGGGTGCCGCACTCCTGGAGATCCACCTCGAGACCGGTCGCACGCATCAGATCCGCGTGCACATGGCGGCCGCACGTCACCCGTGCGTGGGCGATCCGCTCTACGGCGCCGACCCGACGCTCTCGGCGCGTCTGGGCCTGACTCGTCAATGGCTGCACGCCCGCGAGCTCTCGTTCGCCCACCCGCTCAGCGGGGACTGGGTGACGTTCATGTCGGAGTACCCGGCCGATCTGGCGCACGCGCTCGAGATCCTCCGCGGGGACTGA
PROTEIN sequence
Length: 307
VESRALPVPDGLDGTRADAALAKLLGFSRTFAADVVDAGGVSLDGRTVGKSDRLRAGAWLEVSWSPKAEPRVEPVDVPDLGIVYDDDDIVVVDKPAGVAAHPSLGWEGPTVLGALAAGGFRVATTGAPERQGIVHRLDVGTSGLMVVAKTERAYTVLKRAFKERTVEKIYHAVVQGHPDPLSGTIDAPVGRHPTHSWKFAVTPDGKDSVTHYETLEDFPGAALLEIHLETGRTHQIRVHMAAARHPCVGDPLYGADPTLSARLGLTRQWLHARELSFAHPLSGDWVTFMSEYPADLAHALEILRGD*