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SCN18_13_7_16_R2_B_scaffold_4221_3

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(2059..2313)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 84.0
  • Bit_score: 162
  • Evalue 1.70e-37
DNA-directed RNA polymerase subunit omega n=1 Tax=Microbacterium sp. 292MF RepID=UPI000362D5A2 similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 84.0
  • Bit_score: 166
  • Evalue 6.60e-39
rpoZ; DNA-directed RNA polymerase, subunit K/omega similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 84.0
  • Bit_score: 161
  • Evalue 6.00e-38

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Taxonomy

CN-SCN_Microbacterium_18x → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 255
ATGGCCGGAACGAATCAGGGGATCATCGATCCCCCCATCGACACGCTGCTCGAGAAGGTCGACTCGAAGTACCAGCTGGTGATCTTCGCCTCCAAGCGGGCCCGCCAGATCAACGACTACTACTCCGACCTCCACGAGGGCAACCTGTTCGACAATGTCGGGCCCCTCGTCGACTCCACCGTCGAGGACAAGCCGCTGACCATCGCCCTGCACGAGATCCACGAGGACAAGCTCCGCCTCCGCCGAGCCGAGTAG
PROTEIN sequence
Length: 85
MAGTNQGIIDPPIDTLLEKVDSKYQLVIFASKRARQINDYYSDLHEGNLFDNVGPLVDSTVEDKPLTIALHEIHEDKLRLRRAE*