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SCN18_13_7_16_R2_B_scaffold_12035_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(3..1367)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase {ECO:0000313|EMBL:KHK97394.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KHK97394.1};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.1
  • Coverage: 455.0
  • Bit_score: 760
  • Evalue 1.00e-216
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003791991 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 460.0
  • Bit_score: 762
  • Evalue 1.50e-217
ATP-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 456.0
  • Bit_score: 683
  • Evalue 3.20e-194

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1365
ATGGCGGGCGACGAGCAGCTGGTGCGCATCGGCGGCCGACGGCTGCGTCTGACGAATCTCGAGAAGGTCCTGTACCCGGAGACCGGCACCACCAAAGGCGAGGTGATCGACTACTACACCCGCATCGCCCCGTTGCTCATCCCCCACGTCGCCGGCCGTCCCGTGACCCGCAAACGCTGGCCGGAAGGGGTCGACGGCGAGCCGTTCTTCGCGAAGGACCTCGAACGCGGCGCCCCCTCGTGGGTGCACCGTATCCCCATCGACCACTCGACCGGCGCGAAGGACTATCCGCTCGTCGGCGACGTGCCGACCCTCGTGTACCTCGCACAGGTCGCCAGCCTCGAGTTGCACGTGCCGCAGTGGCGGTTCACCCCGGATGGCGGGCGGGGGAACCCGGACCGCATCGTGCTCGACCTCGACCCCGGCCCCGGCACGGGGCTGGCCGAATGCGCCCAGGTCGCCGCCTGGGCACGCGAGATCCTCATGGGCATGGGGCTGGAGCCGTATCCGGTGACGAGCGGGAGCAAGGGCATCCACCTGTACGCGGGCCTGCCCGGAACGCAGACGAGCGACGAGGTCTCGTCCGTCGCCCGTGAGCTGGCGCGCGCCATCGAGGCCGATCATCCCGACCTCGTCGTCAGCCAGATGGCCAAGTCCGCCCGCCCGGGTCGCGTCTTCATCGACTGGAGCCAGAACAACGGGTCGAAGACGACGATCGCTCCGTATTCGCTCCGGGGACGGGCGCACCCGACCGTGGCGGCCCCACGCACGTGGGACGAACTCGACGACCCGGGACTGCGACATCTGCTCTTCGACCAGGTCCTGATGCGCGCCGAGGCCGTCGGAGACCCGATGGCGCCGCTCGGCTTCCGCGCGGGCGGACGGTCCGACGCGACCGGCCCGCTCTCGGCCTACATCGCAAAGCGCAGCGCCGAGCGGACACCCGAACCGGTGCCCGAGAATCCGCTCGCCGCCGCGACGAAGCCGGGAGACCGGCCGCGGTTCGTGATCCAGGAGCACCATGCGTCGCGCCTGCACTGGGACTTCCGCCTCGAGCACGACGGCGTCTTCGTGAGCTGGGCGGTGCCGCGCGGCGTGCCCGCGACGAGCGGACGCAACAACCTCGCCGTCATGACCGAGGACCATCCGCTCGAGTACGGCTCCTTCGAGGGGACCATCCCGCGCGGCGAATACGGTGGCGGGACGGTGACGATCTGGGATGACGGCCGGTACGGCCTCGAGAAGTGGCGCGACGACGAGATCATCCTCACCGCGGAGGGACGCCCCGGCGGCCCGCTCGGGCGGGTCCGGCTGGCGTTGATCCGCACCGACGGCTCCGGCGAGAAGTCCACGTGGCTGCTGCAT
PROTEIN sequence
Length: 455
MAGDEQLVRIGGRRLRLTNLEKVLYPETGTTKGEVIDYYTRIAPLLIPHVAGRPVTRKRWPEGVDGEPFFAKDLERGAPSWVHRIPIDHSTGAKDYPLVGDVPTLVYLAQVASLELHVPQWRFTPDGGRGNPDRIVLDLDPGPGTGLAECAQVAAWAREILMGMGLEPYPVTSGSKGIHLYAGLPGTQTSDEVSSVARELARAIEADHPDLVVSQMAKSARPGRVFIDWSQNNGSKTTIAPYSLRGRAHPTVAAPRTWDELDDPGLRHLLFDQVLMRAEAVGDPMAPLGFRAGGRSDATGPLSAYIAKRSAERTPEPVPENPLAAATKPGDRPRFVIQEHHASRLHWDFRLEHDGVFVSWAVPRGVPATSGRNNLAVMTEDHPLEYGSFEGTIPRGEYGGGTVTIWDDGRYGLEKWRDDEIILTAEGRPGGPLGRVRLALIRTDGSGEKSTWLLH