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SCN18_13_7_16_R2_B_scaffold_11338_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 1..267

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=1 Tax=Mycobacterium avium RepID=UPI0002DFED36 similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 51.0
  • Bit_score: 101
  • Evalue 2.70e-19
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 51.0
  • Bit_score: 100
  • Evalue 1.70e-19
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=342002 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium terrae complex.;" source="Mycobacterium arupense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 51.0
  • Bit_score: 100
  • Evalue 8.50e-19

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Taxonomy

SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → SCNPILOT_CONT_1000_P_Pseudonocardia_72_23 → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 267
CGGATGGCCCGTCAGCTGGTCAGCCACGGCCACTTCACCGTCAACGGTGTGAAGGTCGATGTGCCCAGCTACCAGGTGTCGCAGTACGACATCATCGACGTCAAGGACAAGTCGCTCAACACGGTACCGTTCCAGATCGCCCGGGAGGTCGCCGACACCGTCATCTTCATGGAAAGCGGACACGTTGTTGAGGCGGGATCTCCGACACAGGTCTTCAACGATGCGAGGCATCCCCGCACTCGCGCCTTCCTCGCCAAGGTTCTCTAA
PROTEIN sequence
Length: 89
RMARQLVSHGHFTVNGVKVDVPSYQVSQYDIIDVKDKSLNTVPFQIAREVADTVIFMESGHVVEAGSPTQVFNDARHPRTRAFLAKVL*