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SCN18_13_7_16_R2_B_scaffold_17869_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 2..802

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 206.0
  • Bit_score: 372
  • Evalue 4.60e-100
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium yannicii RepID=UPI0002E4241E similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 206.0
  • Bit_score: 379
  • Evalue 1.60e-102
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 206.0
  • Bit_score: 372
  • Evalue 9.20e-101

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 801
GGCGGCCTGTCCCGGGACCGTGCCGGGATGGAGGTCCGTGACGTCCACCCGTCGCACTACGGCCGCATGTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTCACCGGCTCGCTCGCGTCGTTCGCGCGGATCAACGCGTTCGGCTTCATCGAGACGCCGTACCGCAAGGTCGTCGACGGCCGGGTGACCGACCAGATCGACTACCTCACCGCGTCCGAGGAGAACGACTACATCGTCGCCCAGGCGGGGGTCGAGCTGAAGGCCGACGGCCACTTCGCGCAGGACCGCGTCCTCGCCCGTCGCGGGCAGGGCGGCGAGGTCGACCTGTTCCACGCCGAGGAGATCGGCTACATGGACGTGTCGCCGCGCCAGATGGTCTCGGTCGCGACGTCGCTCATCCCGTTCCTCGAGCACGACGACGCCAACCGCGCCCTCATGGGTGCGAACATGCAGCGCCAGGCGGTGCCGCTCGTGCGCAGCGAGTCGCCCGTCGTCGGCACCGGCATGGAGGGCTACGCCGCGGTGGATGCCGGTGACGTCGTCACCGCGCAGAAGTCCGGCGTCGTGCAGGAGGTCTCGGCCGACGTCGTGACCATCCAGTCGTACAAGGGCCCCATCAAGAAGGGCGACGACCTGTCGCTGTGCGGCCAGACCATGGGCGCCCAGACGGGCTTCGACACGATCGACAAGGTCAAGCAGATCCTCAACCCCGCCTGCAAGGCGGCCGGGAAGGCCATTGGCGAGGAGGCCGGAAAAATCGGCAACAGCCTGGGCGGACTCTTCAAGAAGAAATAG
PROTEIN sequence
Length: 267
GGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNIGLTGSLASFARINAFGFIETPYRKVVDGRVTDQIDYLTASEENDYIVAQAGVELKADGHFAQDRVLARRGQGGEVDLFHAEEIGYMDVSPRQMVSVATSLIPFLEHDDANRALMGANMQRQAVPLVRSESPVVGTGMEGYAAVDAGDVVTAQKSGVVQEVSADVVTIQSYKGPIKKGDDLSLCGQTMGAQTGFDTIDKVKQILNPACKAAGKAIGEEAGKIGNSLGGLFKKK*