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SCN18_13_7_16_R2_B_scaffold_19224_1

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 2..1405

Top 3 Functional Annotations

Value Algorithm Source
Extracellular ligand-binding receptor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJN5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 372.0
  • Bit_score: 316
  • Evalue 2.90e-83
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 372.0
  • Bit_score: 316
  • Evalue 8.10e-84
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEA25895.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 372.0
  • Bit_score: 316
  • Evalue 4.00e-83

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
CACGGCAAGACAGGTGCGATCCTCCCCTTGTTGCAGGGAGCAGAGGCCGGCCGACAACCGCTCCGGCAGCATCGGCACCACGCGGTCGGGGAAATAGACGGAGTTGCCGCGCTCATAGGCAGCACGGTCCAGCGCAGAACCCGGCGTGACGTAGTGGCCGACATCGGCAATCGCCACGATGGCGACGTGACCGCCCGCGTTGCGCGGATCGTCATCCGGGCCTGCCCACACCGCATCGTCGTGATCGCGTGCATCTTCGGGGTCGATCGTGACAAGCGGGATGTGACGCAGATCGGTGCGCCCCTGCCGCTGTCCGGCCCCCTGGCAGACTTCGGCAACAACAGCCTCAACGGCATGAAGATCGCCGCCGACGACATCAACAAGGCCGGCGGCATGAAGTCCCTCGGCGGCGCGAAGCTCAAGATCGTCGCCGGCGACACGAGCTCTGCCGACGCCGGCACCGCGACGAGCTCGACCTCCAAGCTCATCGGCGACGGTGCGGTCGGCCTCATCGGAGCGTGGCTGAGCAACATGACCACGACGGTCAGCACGGTCGCCGAGCAGAGCGAGGTCCCGATCCTCACCCAGTCGTGGGCCGACGCCCTCTCACAGCGCGGCTACAAGTACTACTTCCAGGCACCGCCGAAGTCGAGCGTCATCGGCAAGGCGGCGACCGACTACATGGTCGCCGCGGCGAAGTCGGTGGGCGTGACGTTCACCAAGGTCGCGGGCGTCGGCCCCAACGACGTCGCGAACACGACCCAGATCAACGCGGCCGTCACCGCGTTCAAGGCGGCGGGCGCAGCGGCGGACGCACCCACGTTCTACCAGGCCGGCATCACCGACGCGACGCCGATCATCACGCGCATCGCCGCGCAGAAGGCCGACCTCATCCTGATCAGCGGATCGCCCGCGGACGCGTCGCTGATCGTGAAGGGGATCCGGGCGGCCGGCATCACGACGCCGATCATGGGCTTCGGCGGCGCGTTCGTCGTGCCGAGCTTCGCCAAGGTCATGGGCTCCCAGGTCGACGGCCTGCTGGCGGTCGGCGCCTGGAACTGGGATCTGCCGCTGGACGGCGTCGACAAGGCCGCGTCGGAGTACGAGAAGGCCCACGGCGAGTTCATGCCGATGGAGGCGGGCGAGTCGTGGAACGACGTCTACCTCCTCGTCGCGGCGATGGAGAAGGCGAAGTCGTGCGAGCCGAAGAAGATCGCGGCGGCGCTCCACGGCCTGACGGTCACCTCCGGGCCGGCGGCTGCGATGCCCGGCGGCAAGATCTCCTTCGGCGAGGACGGCACGAACCCGGACGCGACCCCCATCCTGACGCAGTGGAAGGACGGCAAGACCGTCACGGTGTGGCCGAAGGAGTACGCGACGACCACGATCGAACTCACCAAGTGA
PROTEIN sequence
Length: 468
HGKTGAILPLLQGAEAGRQPLRQHRHHAVGEIDGVAALIGSTVQRRTRRDVVADIGNRHDGDVTARVARIVIRACPHRIVVIACIFGVDRDKRDVTQIGAPLPLSGPLADFGNNSLNGMKIAADDINKAGGMKSLGGAKLKIVAGDTSSADAGTATSSTSKLIGDGAVGLIGAWLSNMTTTVSTVAEQSEVPILTQSWADALSQRGYKYYFQAPPKSSVIGKAATDYMVAAAKSVGVTFTKVAGVGPNDVANTTQINAAVTAFKAAGAAADAPTFYQAGITDATPIITRIAAQKADLILISGSPADASLIVKGIRAAGITTPIMGFGGAFVVPSFAKVMGSQVDGLLAVGAWNWDLPLDGVDKAASEYEKAHGEFMPMEAGESWNDVYLLVAAMEKAKSCEPKKIAAALHGLTVTSGPAAAMPGGKISFGEDGTNPDATPILTQWKDGKTVTVWPKEYATTTIELTK*