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SCN18_13_7_16_R2_B_scaffold_25741_2

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: 187..1125

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 312.0
  • Bit_score: 483
  • Evalue 2.20e-133
16S rRNA methyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002D9C6C6 similarity UNIREF
DB: UNIREF100
  • Identity: 81.5
  • Coverage: 313.0
  • Bit_score: 500
  • Evalue 7.20e-139
mraW; S-adenosylmethionine-dependent methyltransferase similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 312.0
  • Bit_score: 483
  • Evalue 4.40e-134

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Taxonomy

Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 939
ATGGACCTTCGCGACATCCACACCCCCGTCATGCTCGAGCGCTGCCTCGCACTGCTCGGTCCGGCGCTCTCGCGGGAGGGCGCCGTCCTGGTCGACGCGACCCTGGGCATGGGCGGACACGCGGAGGCATTCCTGGAGCGCTTTCCGGATCTGCGTGTGATCGGACTCGACCGCGATCGGGACGCCCTCAGGATCGCGGGGGAGAGGCTCGCACGGTTCGGCGAGCGCGTCGTCTTCGTGCACACCGTGTACGACGGGATCGCGGACGCCGTGCGGGGCGTCGGCGCACCCGCCGTCGACGCCGTGCTGTTCGACCTCGGTGTGTCCTCGCTCCAGCTCGACGAAGCGGAGCGCGGCTTCTCCTACGCGCGGGACGCGCCTCTGGACATGCGGATGGACCAGAGCACAGGGATCACGGCCGCCGACGTCCTTGCGACCTACGGCGAAGGCGACCTGCGCAGGATCTTCGAACGCTACGGCGAGGAGAAGCTCGCCGGCCGGTACGCTCGCGCGATCATCTCGGCGCGCAGCGACGGGCGGATCGAGCGCTCCGGCCGGCTGGTCGAGATCCTCGTCGCAGCGACGCCGGCCGCGGTCCAGCGAGCGGGTCATCCCGCCAAGCGGGTCTTCCAGGCGCTGCGCGTCGAGGTGAACGCCGAACTGGCGGCGGTCGAACGAGCCATCCCCGCGGCCCTCGGCGTCCTGGCCGTCGGTGGCCGCATCGTGGTCCTCTCGTACCAGTCGCTCGAGGACCGCATCGTCAAGCGGGCGTTCGCCGACGCCACGACCTCGACCGCTCCCGCCGGGCTCCCCGTCGAGCTCCCCGAACACGCGGCCCGCTTCCGGTTGCTCGTGAAGGGCGCGGAGTTGGCGTCCGACGAGGAGCGCGCGACGAACTCGCGCTCCGCTCCGGTCCGTCTGCGCGCCGCCGAGCGCATC
PROTEIN sequence
Length: 313
MDLRDIHTPVMLERCLALLGPALSREGAVLVDATLGMGGHAEAFLERFPDLRVIGLDRDRDALRIAGERLARFGERVVFVHTVYDGIADAVRGVGAPAVDAVLFDLGVSSLQLDEAERGFSYARDAPLDMRMDQSTGITAADVLATYGEGDLRRIFERYGEEKLAGRYARAIISARSDGRIERSGRLVEILVAATPAAVQRAGHPAKRVFQALRVEVNAELAAVERAIPAALGVLAVGGRIVVLSYQSLEDRIVKRAFADATTSTAPAGLPVELPEHAARFRLLVKGAELASDEERATNSRSAPVRLRAAERI