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SCN18_13_7_16_R2_B_scaffold_25557_2

Organism: SCN18_13_7_16_R2_B_Microbacterium_70_8

near complete RP 47 / 55 MC: 5 BSCG 47 / 51 MC: 4 ASCG 11 / 38
Location: comp(583..1131)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F0F16 similarity UNIREF
DB: UNIREF100
  • Identity: 70.1
  • Coverage: 177.0
  • Bit_score: 224
  • Evalue 5.80e-56
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 180.0
  • Bit_score: 179
  • Evalue 7.90e-43
Putative RNA polymerase sigma factor containing a TPR repeat domain protein {ECO:0000313|EMBL:CDP85400.1}; TaxID=1802 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium farcinogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 177.0
  • Bit_score: 179
  • Evalue 3.90e-42

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 549
CGCGCGCTCATCGCGCTCATGGAGTTCCAGTCCTATCGTTTCGCCACCCGGACCGATGCCGAGGGGTTGCCGGTCCTCCTCGCCGACCAGAATCGCTCCCGCTGGGCCAGCTCCGCGATTGTGCGTGGTCGTGCCGCGCTCGACCACGCGCGACGCGGCGAGTCGGGCCTCGGCTATTACGGGCTCCAGGCCGCGATCGCCGAGGTCCATTCCACCGCGCCGACGTTCGCCGACACCGATTGGGCCCTGATCGTTCGGCTCTACGACGCTCTGCTCCGACTCGCCCCCTCACCGGTGGTCCGGCTCAACCGTGCGGTGGCCGTGTCGATGGCCGATACCCCCGAGAGCGCGCTGCCCCTCGTCGATGAACTGGACGGGGAGCTGGCGGGCTTCCGTCCGTACCACGCCGTGAGAGCCGAGCTGCTCGAGCGCGTGGGACGGACGGCGGATGCGGTGGCCGCCTTCGAGCGCGCGGCGTCGCTTCCCGGCAATGCCGCGGAGGCGATCGCTCTGCGGAGGCGTGCCGCCCTGCTCCGCGACGAATCCTGA
PROTEIN sequence
Length: 183
RALIALMEFQSYRFATRTDAEGLPVLLADQNRSRWASSAIVRGRAALDHARRGESGLGYYGLQAAIAEVHSTAPTFADTDWALIVRLYDALLRLAPSPVVRLNRAVAVSMADTPESALPLVDELDGELAGFRPYHAVRAELLERVGRTADAVAAFERAASLPGNAAEAIALRRRAALLRDES*