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SCN18_13_7_16_R2_B_Microbacterium_70_8

In projects: SCN18_13_7_16_R2_B  |  scn18_genomes

Consensus taxonomy: Microbacterium  →  Actinomycetales  →  Actinobacteridae  →  Actinobacteria  →  Bacteria

Description

SCN18_13_7_16_R2_B_concoct_070

Displaying items 801-850 of 983 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCN18_13_7_16_R2_B_scaffold_21269
Species: CN-SCN_Microbacterium_200x (100%)
2 1310 bp 68.40 6.87 99.85
SCN18_13_7_16_R2_B_scaffold_11067
Genus: Microbacterium (100%)
3 2096 bp 73.47 6.87 94.61
SCN18_13_7_16_R2_B_scaffold_10556
Species: CN-SCN_Leifsonia_139x (50%)
2 2165 bp 74.46 6.86 100.18
SCN18_13_7_16_R2_B_scaffold_19885
Species: SCNPILOT_EXPT_1000_BF_Actinomycetales_Beutenbergia_73_13 (66.67%)
3 1377 bp 69.21 6.86 100.00
SCN18_13_7_16_R2_B_scaffold_12324
Species: CN-SCN_Microbacterium_18x (100%)
2 1947 bp 70.11 6.86 100.00
SCN18_13_7_16_R2_B_scaffold_28694
Species: SCNPILOT_CONT_500_BF_Cellulomonas_73_12_partial (100%)
2 1029 bp 69.97 6.85 100.00
SCN18_13_7_16_R2_B_scaffold_20286
Species: CN-SCN_Microbacterium_37x (50%)
2 1357 bp 71.63 6.85 73.40
SCN18_13_7_16_R2_B_scaffold_9379
Species: Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x (75%)
4 2344 bp 73.34 6.85 97.27
SCN18_13_7_16_R2_B_scaffold_24779
Species: SCNPILOT_CONT_500_BF_Actinomycetales_73_43 (100%)
2 1161 bp 70.46 6.85 97.93
SCN18_13_7_16_R2_B_scaffold_17079
Species: SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 (50%)
2 1539 bp 72.71 6.82 99.42
SCN18_13_7_16_R2_B_scaffold_28547
Species: CN-SCN_Microbacterium_27x (50%)
2 1034 bp 65.57 6.82 83.85
SCN18_13_7_16_R2_B_scaffold_17447
Species: CN-SCN_Microbacterium_18x (50%)
2 1517 bp 69.35 6.82 100.07
SCN18_13_7_16_R2_B_scaffold_14613
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (50%)
2 1720 bp 71.22 6.80 98.20
SCN18_13_7_16_R2_B_scaffold_20520
Species: CN-SCN_Leifsonia_139x (50%)
2 1345 bp 75.09 6.80 79.63
SCN18_13_7_16_R2_B_scaffold_23368
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (50%)
2 1214 bp 72.65 6.80 81.05
SCN18_13_7_16_R2_B_scaffold_20053
Species: CN-SCN_Microbacterium_27x (50%)
4 1369 bp 73.27 6.79 100.58
SCN18_13_7_16_R2_B_scaffold_28358
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (50%)
2 1039 bp 76.03 6.79 99.90
SCN18_13_7_16_R2_B_scaffold_18030
Species: CN-SCN_Microbacterium_18x (100%)
2 1481 bp 72.79 6.79 83.66
SCN18_13_7_16_R2_B_scaffold_16595
Genus: Microbacterium (100%)
3 1571 bp 72.63 6.78 91.28
SCN18_13_7_16_R2_B_scaffold_16884
Genus: Microbacterium (66.67%)
3 1552 bp 69.27 6.77 88.14
SCN18_13_7_16_R2_B_scaffold_17576
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (50%)
2 1509 bp 73.82 6.76 97.22
SCN18_13_7_16_R2_B_scaffold_17936
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (50%)
2 1487 bp 72.29 6.76 94.82
SCN18_13_7_16_R2_B_scaffold_12634
Species: SCNpilot_P_inoc_Microbacterium_67_17 (66.67%)
3 1912 bp 71.39 6.75 94.77
SCN18_13_7_16_R2_B_scaffold_6531
Species: CN-SCN_Microbacterium_18x (50%)
2 2958 bp 69.71 6.74 100.41
SCN18_13_7_16_R2_B_scaffold_17168
Species: CN-SCN_Microbacterium_37x (50%)
2 1535 bp 67.82 6.74 90.88
SCN18_13_7_16_R2_B_scaffold_16476
Species: SCNPILOT_EXPT_1000_BF_Microbacterium_69_10 (66.67%)
3 1579 bp 70.23 6.74 88.92
SCN18_13_7_16_R2_B_scaffold_7096
Species: CN-SCN_Microbacterium_18x (100%)
3 2811 bp 68.34 6.72 96.37
SCN18_13_7_16_R2_B_scaffold_12577
Species: SCNPILOT_CONT_1000_BF_Actinobacteria_69_20 (50%)
2 1919 bp 67.07 6.72 66.60
SCN18_13_7_16_R2_B_scaffold_23008
Species: SCNpilot_P_inoc_Microbacterium_67_17 (50%)
2 1230 bp 73.50 6.71 100.00
SCN18_13_7_16_R2_B_scaffold_7923
Class: Actinobacteria (66.67%)
3 2620 bp 68.32 6.70 94.69
SCN18_13_7_16_R2_B_scaffold_15671
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (100%)
1 1635 bp 68.56 6.70 82.94
SCN18_13_7_16_R2_B_scaffold_25289
Genus: Microbacterium (100%)
3 1142 bp 67.43 6.70 89.32
SCN18_13_7_16_R2_B_scaffold_23947
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (100%)
1 1191 bp 70.53 6.68 99.75
SCN18_13_7_16_R2_B_scaffold_18684
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (50%)
2 1440 bp 68.68 6.67 96.46
SCN18_13_7_16_R2_B_scaffold_19121
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (50%)
2 1416 bp 67.37 6.67 61.23
SCN18_13_7_16_R2_B_scaffold_17976
Species: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53 (100%)
3 1484 bp 73.25 6.67 100.47
SCN18_13_7_16_R2_B_scaffold_5731
Genus: Microbacterium (60%)
5 3223 bp 70.90 6.66 96.34
SCN18_13_7_16_R2_B_scaffold_10713
Species: CN-SCN_Microbacterium_200x (50%)
2 2143 bp 73.64 6.65 88.19
SCN18_13_7_16_R2_B_scaffold_6526
Species: CN-SCN_Microbacterium_18x (100%)
3 2960 bp 69.76 6.64 98.01
SCN18_13_7_16_R2_B_scaffold_5326
Species: CN-SCN_Microbacterium_18x (100%)
5 3387 bp 70.12 6.64 97.17
SCN18_13_7_16_R2_B_scaffold_27609
Species: Microbacterium ginsengisoli_SCNPILOT_CONT_1000_P_Microbacterium_71_138 (100%)
1 1062 bp 68.17 6.64 69.77
SCN18_13_7_16_R2_B_scaffold_17164
Species: CN-SCN_Microbacterium_200x (50%)
2 1535 bp 69.71 6.64 99.48
SCN18_13_7_16_R2_B_scaffold_12362
Species: CN-SCN_Microbacterium_37x (50%)
2 1943 bp 71.38 6.64 98.82
SCN18_13_7_16_R2_B_scaffold_21194
Species: CN-SCN_Microbacterium_18x (66.67%)
3 1313 bp 70.22 6.63 98.93
SCN18_13_7_16_R2_B_scaffold_20290
Species: CN-SCN_Microbacterium_37x (100%)
1 1357 bp 68.68 6.63 89.76
SCN18_13_7_16_R2_B_scaffold_24966
Species: CN-SCN_Microbacterium_37x (100%)
1 1154 bp 71.14 6.63 83.71
SCN18_13_7_16_R2_B_scaffold_23195
Species: SCNPILOT_CONT_500_BF_Actinomycetales_73_43 (50%)
2 1222 bp 71.60 6.63 100.16
SCN18_13_7_16_R2_B_scaffold_25541
Species: Microbacterium testaceum_SCNpilot_P_inoc_Microbacterium_70_36 (50%)
2 1132 bp 73.59 6.63 98.06
SCN18_13_7_16_R2_B_scaffold_22104
Species: CN-SCN_Microbacterium_27x (50%)
2 1269 bp 70.29 6.62 100.00
SCN18_13_7_16_R2_B_scaffold_21661
Genus: Microbacterium (66.67%)
3 1291 bp 66.54 6.62 83.04
Displaying items 801-850 of 983 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.